{"id":"W3036776981","doi":"10.1158/1557-3265.liqbiop20-a18","title":"Abstract A18: Plasma circulating tumor DNA is scarce and confounded by clonal hematopoiesis in metastatic renal cell carcinoma","year":2020,"lang":"en","type":"article","venue":"Clinical Cancer Research","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Spinal Cord Injury BC","funders":"","keywords":"Renal cell carcinoma; Medicine; Oncology; BAP1; Concordance; Internal medicine; Cancer; Liquid biopsy; Somatic cell; Cell-free fetal DNA; Carcinoma; Cancer research; Gene; Biology; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006280964,0.000167247,0.0003187137,0.0009102195,0.0002740003,0.0005943321,0.0002333485,0.0002923261,0.0026157],"category_scores_gemma":[0.002491022,0.0001196167,0.00008523182,0.0005802792,0.0004006613,0.0002552526,0.0002714914,0.0002464856,0.0003643791],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000255443,"about_ca_system_score_gemma":0.0001735941,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001048735,"about_ca_topic_score_gemma":0.0009439465,"domain_scores_codex":[0.9995934,0.00008670763,0.00004747825,0.0001077294,0.0001241214,0.00004057182],"domain_scores_gemma":[0.9986853,0.0006024353,0.0003461425,0.00007519744,0.0001897152,0.0001011926],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0008173277,0.00002833099,0.892036,0.0001233404,0.00005911717,0.001262269,0.0002194539,0.000278923,0.08891963,0.0001582118,0.0003947165,0.01570264],"study_design_scores_gemma":[0.00001541853,0.0003365297,0.9565413,0.00002526967,0.00006191569,0.007474029,0.0002603925,0.001499473,0.03187386,0.0002407041,0.001663845,0.000007312373],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9968126,0.001211885,0.0007786506,0.00007107286,0.00001061517,0.000007119438,0.0002231844,0.00002237098,0.0008624448],"genre_scores_gemma":[0.9993285,0.00007893456,0.0003288768,0.00003035214,0.000009802337,0.000003154839,0.00009744368,0.000005115626,0.0001178411],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0026157,"threshold_uncertainty_score":0.008750379,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1276677893521942,"score_gpt":0.4196837282167131,"score_spread":0.2920159388645188,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}