{"id":"W3037469487","doi":"10.1186/s12864-020-06846-x","title":"Intra-specific comparison of mitochondrial genomes reveals host gene fragment exchange via intron mobility in Tremella fuciformis","year":2020,"lang":"en","type":"article","venue":"BMC Genomics","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"National Natural Science Foundation of China","keywords":"Biology; Genetics; Gene; Intron; Mitochondrial DNA; Intergenic region; Genome; Transfer RNA; Gene duplication; Conserved sequence; RNA; Peptide sequence","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001975524,0.0002162779,0.0001741138,0.0006463055,0.0002870229,0.0002625443,0.0001841133,0.0002461206,0.0005396496],"category_scores_gemma":[0.0004402276,0.0001160038,0.0002731638,0.0003764091,0.0001746131,0.0001743434,0.000294046,0.0002585198,0.000231344],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002251796,"about_ca_system_score_gemma":0.0001587294,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008254675,"about_ca_topic_score_gemma":0.001006721,"domain_scores_codex":[0.9998894,0.00001048181,0.000008030761,0.00004436982,0.00002110491,0.00002672347],"domain_scores_gemma":[0.9996588,0.00009579943,0.0001339978,0.00002367225,0.00003878872,0.00004905141],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000368207,0.00002210463,0.0149253,0.0001050478,0.00001972231,0.0001702062,0.0002876349,0.0001565819,0.9799491,0.00008741009,0.00002543332,0.00388325],"study_design_scores_gemma":[0.00003443197,0.000641689,0.7002993,0.00005068165,0.0001320515,0.002140143,0.0008094233,0.004064652,0.2868199,0.00031157,0.004660765,0.00003553522],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985641,0.000141384,0.0007215494,0.00000961759,0.000001427032,0.000003167482,0.0003065736,0.00001603621,0.0002361691],"genre_scores_gemma":[0.9967415,0.00008998068,0.001680888,0.00001141693,0.000001699407,0.000009898937,0.001189486,0.00001146351,0.0002637594],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008254675,"threshold_uncertainty_score":0.001805365,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03147228287034393,"score_gpt":0.2522503661430094,"score_spread":0.2207780832726655,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}