{"id":"W3037610980","doi":"10.1101/2020.06.26.169458","title":"Virus-host protein-protein interactions between human papillomavirus 16 E6 A1 and D2/D3 sub-lineages: variances and similarities","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"NOSM University; Lakehead University; Thunder Bay Regional Research Institute","funders":"Natural Sciences and Engineering Research Council of Canada; Mitacs","keywords":"Biology; Carcinogenesis; Interactome; Genetics; Virus; Computational biology; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003131716,0.0002013095,0.0002203982,0.0007398447,0.0002033641,0.0005296274,0.0001230058,0.0002462305,0.001154533],"category_scores_gemma":[0.0004533261,0.0001418434,0.0003813517,0.0005214417,0.0001727853,0.0003040748,0.0003892295,0.0002615477,0.0002516177],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001511411,"about_ca_system_score_gemma":0.00009343078,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004109688,"about_ca_topic_score_gemma":0.0003916915,"domain_scores_codex":[0.9997178,0.00003974698,0.0000243297,0.00008264516,0.00008746434,0.00004800542],"domain_scores_gemma":[0.9996276,0.0001213015,0.000100524,0.00003933724,0.00006061728,0.00005056221],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003238912,0.00003974498,0.04461843,0.00008430101,0.00008768366,0.0001236366,0.00009406458,0.00009307887,0.9506109,0.0001293341,0.00003972751,0.003755266],"study_design_scores_gemma":[0.00001163938,0.0002804527,0.7426209,0.00001023063,0.0001318392,0.00116377,0.000340073,0.003182428,0.2501499,0.000321514,0.001774939,0.00001229166],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9972062,0.0005495814,0.001295316,0.00001571169,0.000003269522,0.000009742725,0.0002572852,0.00001607036,0.0006468609],"genre_scores_gemma":[0.9980016,0.0001641179,0.0009217561,0.00001501076,0.000002201273,0.000008832106,0.0004669193,0.000005934008,0.0004135384],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001154533,"threshold_uncertainty_score":0.003862321,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04602924121927554,"score_gpt":0.3026831777145156,"score_spread":0.25665393649524,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}