{"id":"W3038117299","doi":"10.3390/microorganisms8070964","title":"Metabolic Activation of CsgD in the Regulation of Salmonella Biofilms","year":2020,"lang":"en","type":"article","venue":"Microorganisms","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":36,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Regina; University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Saskatchewan Health Research Foundation","keywords":"Biofilm; rpoS; Salmonella; Biology; Microbiology; Regulator; Psychological repression; Cell biology; Bacteria; Gene expression; Gene; Biochemistry; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001257,0.0000631607,0.0001129099,0.00002378825,0.00001769283,0.000005042565,0.0001514021,0.0000498935,0.00001625165],"category_scores_gemma":[0.0001085715,0.00004743983,0.00003443887,0.0001739131,0.00006396104,0.000002832879,0.00007203058,0.00004128478,0.000002487999],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000003029628,"about_ca_system_score_gemma":0.00002873818,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002560241,"about_ca_topic_score_gemma":0.000005103034,"domain_scores_codex":[0.9994574,0.00006923793,0.0001584664,0.0001258315,0.00009735327,0.00009171219],"domain_scores_gemma":[0.9996954,0.00001043253,0.00007525468,0.000149283,0.00005462995,0.00001503611],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004706111,0.00002412988,0.001388729,0.00001968192,0.00002019383,1.298073e-7,0.0005039068,0.000009365033,0.997148,0.00007886263,0.0003698851,0.0003900855],"study_design_scores_gemma":[0.0002335816,0.00009879054,0.07257047,0.000004534667,0.000005273758,6.527852e-7,0.0002099883,0.000007229218,0.924555,0.00002550314,0.002247739,0.00004123315],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.998285,0.0002640406,0.0002227871,0.0008932915,0.0000124524,0.0001438665,0.00001100991,0.000002411972,0.000165119],"genre_scores_gemma":[0.999209,0.00009225914,0.0004319777,0.0001400789,0.00005385042,0.000004075369,0.00004183848,0.000008048727,0.00001883746],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07259297,"threshold_uncertainty_score":0.193454,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01683919101708768,"score_gpt":0.2500061606592998,"score_spread":0.2331669696422121,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}