{"id":"W3038225569","doi":"10.3389/fgene.2020.00550","title":"SNPs in lncRNA Regions and Breast Cancer Risk","year":2020,"lang":"en","type":"article","venue":"Frontiers in Genetics","topic":"Cancer-related molecular mechanisms research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Cancer Institute; National Health and Medical Research Council; Medical Research Council; Canadian Institutes of Health Research; Syöpäsäätiö; Helsingin ja Uudenmaan Sairaanhoitopiiri; Government of Canada; Sigrid Juséliuksen Säätiö; Genome Canada; Fondation du cancer du sein du Québec; National Institutes of Health; Ovarian Cancer Research Fund; U.S. Department of Defense; European Commission; Breast Cancer Research Foundation; Susan G. Komen for the Cure; Génome Québec","keywords":"Breast cancer; Single-nucleotide polymorphism; Biology; Genetics; Computational biology; Cancer; Oncology; Medicine; Gene; Genotype","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001063186,0.0001414995,0.0001598689,0.00008478545,0.00003621682,0.00001970921,0.0001914844,0.0001954258,0.00001815724],"category_scores_gemma":[0.0000493308,0.0001590028,0.0000405994,0.0002566774,0.00008832399,0.000002333837,0.000170195,0.0002677113,0.000002596741],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000456448,"about_ca_system_score_gemma":0.0001249679,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001255514,"about_ca_topic_score_gemma":0.0002921608,"domain_scores_codex":[0.9988403,0.0000917795,0.000185587,0.0004215203,0.0001454551,0.0003152977],"domain_scores_gemma":[0.9995238,0.000003752645,0.00004846837,0.0002307472,0.00003898066,0.0001542384],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001141955,0.0002005566,0.2808462,0.0001700813,0.0003025333,0.000143368,0.001329111,0.02162509,0.4709463,0.0001106756,0.09907261,0.1241115],"study_design_scores_gemma":[0.01335732,0.001558608,0.18652,0.0002871732,0.0002009835,0.0001345727,0.00239108,0.08722506,0.4133947,0.002913025,0.2891843,0.002833197],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8325073,0.03847967,0.1219611,0.004543896,0.0007335801,0.0008710159,0.0003094133,0.0000254606,0.0005685447],"genre_scores_gemma":[0.9636791,0.02792764,0.007279851,0.0006316164,0.0002261965,0.00005302503,0.00003190659,0.00004709786,0.0001235223],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1901117,"threshold_uncertainty_score":0.6483947,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0086457000173864,"score_gpt":0.2476822767335672,"score_spread":0.2390365767161808,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}