{"id":"W3038263275","doi":"10.1186/s12915-020-00808-1","title":"Genome assembly of the basket willow, Salix viminalis, reveals earliest stages of sex chromosome expansion","year":2020,"lang":"en","type":"article","venue":"BMC Biology","topic":"Genetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":72,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Uppsala Multidisciplinary Center for Advanced Computational Science; Natural Sciences and Engineering Research Council of Canada; Science for Life Laboratory; Energimyndigheten; European Research Council; Vetenskapsrådet; Svenska Forskningsrådet Formas; Knut och Alice Wallenbergs Stiftelse; Canada Research Chairs; University College London","keywords":"Biology; Willow; Salix viminalis; Genome; Genetics; Chromosome; Botany; Evolutionary biology; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001620023,0.0004370363,0.0002502998,0.0007672939,0.0004053353,0.0003850699,0.0002454343,0.000318366,0.001108321],"category_scores_gemma":[0.0003953429,0.000215494,0.0004859762,0.0004984036,0.0001364705,0.0003052997,0.0002849479,0.0003995516,0.0005906538],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003482708,"about_ca_system_score_gemma":0.000390188,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002463117,"about_ca_topic_score_gemma":0.005794645,"domain_scores_codex":[0.9999044,0.000004999172,0.000007385312,0.00004410987,0.00002870495,0.00001042782],"domain_scores_gemma":[0.999799,0.00003081428,0.00008251105,0.00001865588,0.00003417785,0.00003486033],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000127612,0.00001062302,0.005726806,0.0002175833,0.00002804871,0.0001286076,0.0001554575,0.000287989,0.9868855,0.00009804322,0.0002649908,0.006068734],"study_design_scores_gemma":[0.000048309,0.0004845302,0.6035327,0.0001184652,0.0003703766,0.001392732,0.000521166,0.008390684,0.3422311,0.0006646122,0.04218283,0.00006245475],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9436731,0.00210803,0.02202742,0.0002664334,0.00006269596,0.0001205,0.02763003,0.001505547,0.002606201],"genre_scores_gemma":[0.8278126,0.001543203,0.0710928,0.0002137889,0.00004426593,0.0001613563,0.09500031,0.0008292469,0.003302396],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002463117,"threshold_uncertainty_score":0.004897535,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0220756623367869,"score_gpt":0.2686057531540815,"score_spread":0.2465300908172946,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}