{"id":"W3038510013","doi":"10.3390/biology9070153","title":"A First Insight into North American Plant Pathogenic Fungi Armillaria sinapina Transcriptome","year":2020,"lang":"en","type":"article","venue":"Biology","topic":"Fungal Biology and Applications","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université du Québec à Trois-Rivières","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Biology; Transcriptome; Secondary metabolism; Betulin; Betulinic acid; Fungus; De novo transcriptome assembly; Botany; Illumina dye sequencing; Plant disease resistance; Gene; Gene expression; Biochemistry; Biosynthesis; Genome; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00003537894,0.0001388024,0.0003190722,0.00003972533,0.00009784203,0.000002738745,0.0001161661,0.0001066223,0.00008013099],"category_scores_gemma":[0.00005115483,0.0001073338,0.00008567473,0.0003125187,0.0002639506,0.00001253748,0.00002935396,0.0001999529,0.0002642286],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002132091,"about_ca_system_score_gemma":0.00005612856,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006352988,"about_ca_topic_score_gemma":0.0002090127,"domain_scores_codex":[0.9991623,0.00004402557,0.0001985264,0.000332247,0.00003583793,0.0002271092],"domain_scores_gemma":[0.9994706,0.00006397886,0.00005920923,0.0001923206,0.00003030463,0.0001836073],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0009353845,0.0002178604,0.3978715,0.0001037753,0.0002325035,0.00008471479,0.002629994,0.000002111638,0.5805898,0.00556159,0.003109772,0.008661045],"study_design_scores_gemma":[0.0008651279,0.00187455,0.3855763,0.000009105237,0.0001008601,0.00007560756,0.00007447244,0.000116869,0.002147954,0.00008398903,0.6088514,0.0002237047],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9784644,0.001358413,0.0004600972,0.01828032,0.0001067805,0.0003274268,0.0001552689,0.0001258127,0.000721505],"genre_scores_gemma":[0.9913177,0.0004545361,0.0006834897,0.006743071,0.0002515824,0.0000538133,0.0004569826,0.00001170278,0.00002712035],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6057417,"threshold_uncertainty_score":0.4376947,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02162602341297854,"score_gpt":0.2528091175399856,"score_spread":0.2311830941270071,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}