{"id":"W3038779260","doi":"10.1101/2020.07.06.190751","title":"Identification of Bovine Genotypes Conferring Diminished Susceptibility to Salmonellosis and Colonization by <i>Salmonella</i> and <i>E. coli</i> O157:H7","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Genetics","funders":"Iowa State University","keywords":"Salmonella; Genotype; Biology; Ex vivo; Single-nucleotide polymorphism; Microbiology; SNP; Genetics; In vivo; Gene; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002548181,0.0001929819,0.0002390068,0.0005115457,0.0001824995,0.0003730417,0.0001133436,0.0002925896,0.0009497554],"category_scores_gemma":[0.0002958079,0.0001567731,0.0002043859,0.0002584792,0.0001950025,0.00007243211,0.0001449186,0.0002658746,0.0002176909],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002341698,"about_ca_system_score_gemma":0.000104874,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002994154,"about_ca_topic_score_gemma":0.003929879,"domain_scores_codex":[0.9996643,0.00004754841,0.00003006011,0.00009673021,0.00006866595,0.00009279566],"domain_scores_gemma":[0.9996569,0.00007015858,0.0001404373,0.00001954948,0.0000380268,0.00007493432],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004364368,0.00005902284,0.03116639,0.00003336362,0.00002039325,0.00008403882,0.00009815292,0.00004556784,0.967057,0.00002574369,0.00002644936,0.0009473213],"study_design_scores_gemma":[0.00002373049,0.001425174,0.8451566,0.00002020036,0.00009244109,0.001205361,0.00045041,0.0009573594,0.1493276,0.00003218135,0.001292684,0.00001614391],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992569,0.00008031206,0.0002385225,0.00000944138,0.000002210599,0.000006216119,0.0002496423,0.000004139296,0.0001525617],"genre_scores_gemma":[0.998477,0.00007020963,0.0005650952,0.0000236507,0.000002359232,0.000006186191,0.000554029,0.000005838353,0.0002955149],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002994154,"threshold_uncertainty_score":0.005953431,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01648798465324178,"score_gpt":0.2151375947520712,"score_spread":0.1986496100988294,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}