{"id":"W3039105678","doi":"10.1101/2020.06.29.178798","title":"Accounting for imperfect detection reveals role of host traits in structuring viral diversity of a wild bat community","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Infection and Immunity","funders":"University of Connecticut; National Science Foundation","keywords":"Biology; Host (biology); Species richness; Ecology; Population; Community; Evolutionary biology; Habitat; Demography","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003798537,0.0004062447,0.0005684434,0.0004339218,0.0003817044,0.001172176,0.0006952875,0.0006364119,0.0008753447],"category_scores_gemma":[0.01106416,0.0003814259,0.0005558099,0.000271881,0.0009707295,0.001208596,0.000847353,0.0007509459,0.0001612963],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006321028,"about_ca_system_score_gemma":0.0006076923,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004875591,"about_ca_topic_score_gemma":0.004035802,"domain_scores_codex":[0.9986307,0.0006253258,0.00006228517,0.0004406852,0.0001038677,0.0001371446],"domain_scores_gemma":[0.9910998,0.005197497,0.001452834,0.001592993,0.000331014,0.0003257677],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003897311,0.0001754303,0.6602932,0.0001454905,0.0005079017,0.0002525175,0.0005820854,0.2551894,0.05274336,0.006214755,0.0004820244,0.02302402],"study_design_scores_gemma":[0.00001344126,0.0001514071,0.1526151,0.00001586391,0.00008331842,0.0001404021,0.0002192579,0.8328444,0.005886416,0.007668487,0.0003165848,0.00004535161],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9615233,0.00007490728,0.03778435,0.00008816803,0.000007332199,0.000009837839,0.0001335946,0.00009355171,0.000284942],"genre_scores_gemma":[0.9967151,0.00001094264,0.00308121,0.00001401392,0.000003240002,0.000006027682,0.00006571555,0.00001357872,0.00009035553],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004875591,"threshold_uncertainty_score":0.02008879,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02007196883896524,"score_gpt":0.2403832683092186,"score_spread":0.2203112994702534,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}