{"id":"W3040520681","doi":"10.1186/s12866-020-01860-1","title":"Unveiling protist diversity associated with the Pacific oyster Crassostrea gigas using blocking and excluding primers","year":2020,"lang":"en","type":"article","venue":"BMC Microbiology","topic":"Marine Bivalve and Aquaculture Studies","field":"Environmental Science","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Agence Nationale de la Recherche; McGill University","keywords":"Biology; Protist; Pacific oyster; Oyster; Crassostrea; Gymnodinium; Ecology; Zoology; Genetics; Gene; Phytoplankton","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000140629,0.0001380303,0.000163976,0.000008135511,0.0005975923,0.00002204397,0.0001327759,0.00005624304,0.0001066625],"category_scores_gemma":[0.00005169122,0.00008337632,0.00003575315,0.0001242664,0.0003398061,0.0000527052,0.0008334899,0.0001271556,0.000018339],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005618438,"about_ca_system_score_gemma":0.000006751384,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001240956,"about_ca_topic_score_gemma":0.00028947,"domain_scores_codex":[0.9992074,0.00009985142,0.00009857497,0.0003032032,0.00004875609,0.0002421548],"domain_scores_gemma":[0.999701,0.00007151662,0.0000972238,0.000077751,0.000008700507,0.00004378523],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00002410206,0.00001200814,0.7834441,0.0000102622,0.00005513329,0.000004465668,0.001937825,0.0001048454,0.213286,0.000005394603,0.00102814,0.00008770377],"study_design_scores_gemma":[0.003604445,0.0007863077,0.9246829,0.0001923791,0.0006153234,0.0001834345,0.01318603,0.00258312,0.0254734,0.00006414101,0.02683391,0.001794637],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9975708,0.00005556827,0.0002822368,0.0006845218,0.00002513553,0.000255534,0.000008695679,0.0000312173,0.001086301],"genre_scores_gemma":[0.9990523,0.000003510749,0.0004269739,0.0003214531,0.00003146894,0.000002534474,0.000007955105,0.000007333341,0.0001463958],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1878126,"threshold_uncertainty_score":0.4596257,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03710598818532063,"score_gpt":0.2206788116917187,"score_spread":0.1835728235063981,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}