{"id":"W3040909678","doi":"10.1016/j.ijfoodmicro.2020.108776","title":"An agent-based simulator for the gastrointestinal pathway of Listeria monocytogenes","year":2020,"lang":"en","type":"article","venue":"International Journal of Food Microbiology","topic":"Listeria monocytogenes in Food Safety","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"ca_institutions":"Public Health Agency of Canada; York University","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Government of Ontario; Public Health Agency of Canada; Cleveland State University","keywords":"Stomach; Listeria monocytogenes; Ingestion; Human stomach; Digestion (alchemy); Pathogen; Small intestine; Biology; Bacteria; Microbiology; Medicine; Gastroenterology; Chemistry; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000153947,0.0004543261,0.0003199516,0.0001482689,0.0002626822,0.0004729006,0.0009875557,0.0007725246,0.002564053],"category_scores_gemma":[0.000429339,0.0001836619,0.0003428282,0.00009221074,0.0001913443,0.0003093247,0.000628678,0.0004779527,0.0002878724],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003599696,"about_ca_system_score_gemma":0.0005920759,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002501769,"about_ca_topic_score_gemma":0.001514154,"domain_scores_codex":[0.9999298,0.00001665243,0.00000372915,0.00001302821,0.00002478008,0.00001204339],"domain_scores_gemma":[0.9997804,0.00008743771,0.00002413018,0.00002594666,0.00003847507,0.0000436565],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0008658197,0.000550919,0.004315442,0.0002941154,0.00007061423,0.0005557248,0.000217918,0.640557,0.332729,0.003105653,0.0007006117,0.01603725],"study_design_scores_gemma":[0.00009642472,0.0004647836,0.0006422724,0.000009711516,0.00002217477,0.00006382421,0.00003392395,0.9542787,0.04130983,0.00047016,0.002585762,0.00002240421],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.873677,0.0002496126,0.117904,0.0002145508,0.0001602983,0.0002275748,0.0005003756,0.001709349,0.005357192],"genre_scores_gemma":[0.9651634,0.0001527725,0.03156643,0.00003679382,0.000004915612,0.0001008321,0.0002523927,0.00005375663,0.00266857],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002564053,"threshold_uncertainty_score":0.008577585,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07689102721210729,"score_gpt":0.3298038227357283,"score_spread":0.252912795523621,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}