{"id":"W3041214588","doi":"10.1101/2020.07.07.192336","title":"Seasonal shifts in the gut microbiome indicate plastic responses to diet in wild geladas","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Canadian Institute for Advanced Research; Arizona State University; University of Michigan; National Institutes of Health; Stony Brook University; National Science Foundation","keywords":"Biology; Microbiome; Zoology; Gut microbiome; Primate; Ecology; Gut flora; Gut bacteria; Immunology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001870262,0.0002979533,0.0003545824,0.0005171724,0.0003437584,0.0005948449,0.000240815,0.0004419747,0.00150454],"category_scores_gemma":[0.0003560443,0.0002712999,0.0002465293,0.0002782569,0.0007301185,0.0003229441,0.0005554972,0.0006608231,0.0002707994],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002242639,"about_ca_system_score_gemma":0.0001210389,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001558953,"about_ca_topic_score_gemma":0.005586912,"domain_scores_codex":[0.9998469,0.00001692805,0.000007023287,0.00008929593,0.00001346368,0.00002629631],"domain_scores_gemma":[0.9996666,0.00005372248,0.0001308741,0.00004361126,0.0000227214,0.00008249054],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001568269,0.0001222848,0.37226,0.0001198631,0.0001450171,0.0003860625,0.001433307,0.0002050498,0.6179082,0.0001429523,0.0002293941,0.005479578],"study_design_scores_gemma":[0.00001074457,0.0002685212,0.9925021,0.00001198255,0.00003048705,0.000349461,0.001165883,0.0001677281,0.004822214,0.0001006802,0.0005580729,0.00001201799],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994635,0.00004960761,0.0001016763,0.00001148601,0.000002848409,0.000001746336,0.0002329422,0.000007483389,0.0001288375],"genre_scores_gemma":[0.9987159,0.00004307894,0.0005040929,0.00006021426,0.000003092967,0.00001635975,0.0003423959,0.00001553241,0.0002994035],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001558953,"threshold_uncertainty_score":0.005033195,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01607894924142874,"score_gpt":0.2470049595437692,"score_spread":0.2309260103023404,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}