{"id":"W3041323680","doi":"10.3389/fmicb.2020.01594","title":"Burkholderia cepacia Complex Taxon K: Where to Split?","year":2020,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Fonds Wetenschappelijk Onderzoek; Belgian Federal Science Policy Office; Vlaamse regering; Universiteit Gent; Cystic Fibrosis Canada; University of Oxford; Vlaams Supercomputer Centrum; Wellcome Trust; Cystic Fibrosis Foundation","keywords":"Clade; Multilocus sequence typing; Biology; Burkholderia cepacia complex; Taxon; Phylogenetic tree; Phylogenetics; Microbiology; Burkholderia; Genetics; Genotype; Ecology; Bacteria; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001240319,0.0003149063,0.0006685051,0.0008171974,0.001374505,0.002600858,0.0006284509,0.001042475,0.001694669],"category_scores_gemma":[0.002203735,0.0001989517,0.0002037509,0.001181079,0.0009284884,0.003403889,0.001216311,0.001188476,0.00105155],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008066238,"about_ca_system_score_gemma":0.001575936,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005737972,"about_ca_topic_score_gemma":0.01219108,"domain_scores_codex":[0.9993883,0.0001418561,0.00009038532,0.0001143872,0.00007754911,0.0001874541],"domain_scores_gemma":[0.9985222,0.0001789501,0.0004199998,0.0001039777,0.0004294928,0.0003454628],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001166519,0.0002329303,0.5383857,0.0008944294,0.00007770473,0.00450433,0.006782248,0.0003940674,0.07035265,0.00249777,0.005384717,0.369327],"study_design_scores_gemma":[0.00006182693,0.0006074377,0.8372886,0.001557411,0.0001461546,0.01100597,0.05652764,0.001722863,0.009289486,0.008434677,0.0732052,0.0001526625],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9687974,0.01364087,0.004314073,0.008364456,0.0004570785,0.00008671456,0.0002691432,0.00009247062,0.003977707],"genre_scores_gemma":[0.977431,0.007932486,0.008881235,0.00336814,0.0002944863,0.00002411659,0.000675749,0.00005146319,0.001341319],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005737972,"threshold_uncertainty_score":0.0114091,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0252815078910434,"score_gpt":0.2918137104840365,"score_spread":0.2665322025929932,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}