{"id":"W3041503826","doi":"10.1186/s13567-020-00813-w","title":"Population structure, genetic diversity and pathotypes of Streptococcus suis isolated during the last 13 years from diseased pigs in Switzerland","year":2020,"lang":"en","type":"article","venue":"Veterinary Research","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal","funders":"Universität Zürich","keywords":"Streptococcus suis; Multilocus sequence typing; Biology; Virulence; Population; Microbiology; Serotype; Genetic diversity; Genetics; Pathogen; Typing; Virulence factor; Genotype; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002904116,0.0002649561,0.0001966244,0.001071646,0.0002377246,0.0004715284,0.0001139309,0.0003250185,0.0005761943],"category_scores_gemma":[0.0003223268,0.0001135239,0.000266654,0.0004466614,0.0004381928,0.0001910905,0.0002211537,0.0001509527,0.0001467934],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004227742,"about_ca_system_score_gemma":0.0002746945,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009697975,"about_ca_topic_score_gemma":0.01068467,"domain_scores_codex":[0.9998079,0.0000310918,0.00001405371,0.00005906606,0.0000399837,0.00004793823],"domain_scores_gemma":[0.9997941,0.0000398433,0.00006206263,0.00001339817,0.00004170107,0.00004890287],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001437931,0.00002170368,0.9874385,0.00001201814,0.00002816559,0.0002190145,0.0004703479,0.000303023,0.008215494,0.00001767862,0.00003956956,0.0030907],"study_design_scores_gemma":[0.000001976482,0.0001230539,0.998995,0.000002382343,0.00000677085,0.0001418506,0.0002115279,0.0001959193,0.0002311485,0.00000550295,0.00008263701,0.000002295838],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9997937,0.00003945048,0.00004218255,0.000003499493,9.138033e-7,0.000001661333,0.00005008146,0.000001659692,0.00006685343],"genre_scores_gemma":[0.9996821,0.00002984537,0.00003619306,0.000002690098,0.000001914786,0.000002333941,0.0001537505,6.324016e-7,0.00009056315],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009697975,"threshold_uncertainty_score":0.01928306,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06914238182465515,"score_gpt":0.333454762871448,"score_spread":0.2643123810467928,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}