{"id":"W3041619054","doi":"10.1164/ajrccm-conference.2020.201.1_meetingabstracts.a2939","title":"The Tumour-Resident Microbiome Is Associated with Cancer Hypomethylation Status in Lung Adenocarcinoma","year":2020,"lang":"en","type":"article","venue":"","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"St. Paul's Hospital","funders":"","keywords":"Lung cancer; Adenocarcinoma; Microbiome; Cancer; Medicine; Oncology; Methylation; Cancer research; Internal medicine; Biology; Bioinformatics; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001980635,0.0001278022,0.0003344989,0.000394664,0.0002718201,0.0005393886,0.000180637,0.0003456782,0.001647338],"category_scores_gemma":[0.0009567031,0.0001897491,0.0002699871,0.0005910638,0.0002100114,0.0002304313,0.0003877461,0.0003943334,0.0002173924],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001735266,"about_ca_system_score_gemma":0.0001566034,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001679248,"about_ca_topic_score_gemma":0.001871548,"domain_scores_codex":[0.9998201,0.00004493246,0.00001981563,0.00004621275,0.0000327715,0.00003630031],"domain_scores_gemma":[0.9994422,0.00009812501,0.0002604366,0.00003559632,0.0000619078,0.0001016816],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001376176,0.00005228988,0.9407612,0.00008416657,0.0002722021,0.0002247078,0.0001903411,0.0001149323,0.0493956,0.000075695,0.0001624956,0.007290254],"study_design_scores_gemma":[0.000005033807,0.00008772232,0.996973,0.000007965022,0.00007103807,0.0003529447,0.000157794,0.0003519084,0.0015387,0.0001055267,0.0003431833,0.000004966467],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980971,0.001129144,0.0002015761,0.0000706815,0.00001076038,0.000002005709,0.0001909489,0.000007670616,0.0002901943],"genre_scores_gemma":[0.9993969,0.0001810276,0.00008651821,0.00001694582,0.000007442701,0.000002051294,0.0001158871,0.000003121529,0.0001901774],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001679248,"threshold_uncertainty_score":0.005510867,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01404538228961687,"score_gpt":0.2541286222175963,"score_spread":0.2400832399279794,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}