{"id":"W3041661950","doi":"10.17504/protocols.io.bh98j99w","title":"SARS-CoV2 GISAID submission protocol v1","year":2020,"lang":"en","type":"preprint","venue":"","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Protocol (science); Computer science; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.01428884,0.001099186,0.001338936,0.002793473,0.002454525,0.004865494,0.003456988,0.002568814,0.2738619],"category_scores_gemma":[0.03307003,0.001806414,0.0008711441,0.002567718,0.00087208,0.002716228,0.005507584,0.00289546,0.2778911],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00155584,"about_ca_system_score_gemma":0.006115183,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004749394,"about_ca_topic_score_gemma":0.004209391,"domain_scores_codex":[0.9870347,0.004795874,0.002010026,0.001106895,0.003878757,0.001173608],"domain_scores_gemma":[0.9820992,0.004046774,0.001051373,0.005007532,0.006700812,0.001094361],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0008788548,0.00008304012,0.0006400956,0.0008026434,0.00004178877,0.0001574434,0.0003506959,0.0001705255,0.009322519,0.004103146,0.9644352,0.01901404],"study_design_scores_gemma":[0.000143196,0.00008298326,0.001014495,0.0002157871,0.00001775398,0.0001767459,0.0001950817,0.0002772305,0.01040148,0.002243306,0.9851755,0.00005648604],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"protocol","genre_scores_codex":[0.008354458,0.001702957,0.1274139,0.008004195,0.003730669,0.01856544,0.6499192,0.07766608,0.1046432],"genre_scores_gemma":[0.01512204,0.001278496,0.07619327,0.003586321,0.0006331234,0.02285379,0.7722857,0.01953209,0.08851528],"genre_candidate":"protocol","genre_consensus":null,"teacher_disagreement_score":0.2738619,"threshold_uncertainty_score":0.9161595,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1228165304629288,"score_gpt":0.3889010005422835,"score_spread":0.2660844700793548,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}