{"id":"W3044032748","doi":"10.1128/mbio.00807-20","title":"Microbial Species Coexistence Depends on the Host Environment","year":2020,"lang":"en","type":"article","venue":"mBio","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Horizon 2020 Framework Programme; Deutsche Forschungsgemeinschaft; Canadian Institute for Advanced Research; Wissenschaftskolleg zu Berlin; Deutscher Akademischer Austauschdienst; European Commission","keywords":"Host (biology); Biology; Microbiome; Abundance (ecology); Microbial population biology; Relative species abundance; Ecology; Ecosystem; Competition (biology); Microbial ecology; Bacteria; Genetics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005563375,0.00008860052,0.00006851156,0.000005353081,0.00009739064,0.00002653108,0.0002059558,0.00003654624,0.000164703],"category_scores_gemma":[0.00008309996,0.00006037207,0.0000478891,0.00002577773,0.0001320828,9.415066e-7,0.0002473578,0.00007082756,0.0001999759],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001084286,"about_ca_system_score_gemma":0.00001350107,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000004016114,"about_ca_topic_score_gemma":0.000005151699,"domain_scores_codex":[0.9994044,0.00003810811,0.00007151722,0.000211448,0.0001061562,0.0001683322],"domain_scores_gemma":[0.9997054,0.00001133803,0.0000217197,0.0002006767,0.00001020318,0.00005064557],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005742371,0.0000160074,0.0003113968,0.000003938104,0.00002650648,0.000003708514,0.00008160801,0.000001714527,0.985416,0.00006539504,0.01389893,0.0001173469],"study_design_scores_gemma":[0.0001470075,0.0002577216,0.008576606,0.000002786376,0.000003233082,0.000001296605,0.00009022815,0.000002896698,0.6324957,0.00000229892,0.3583443,0.00007592783],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.981716,0.0001631748,0.00005774507,0.01312536,0.00005399218,0.0001472213,0.00005056252,0.000007862001,0.004678067],"genre_scores_gemma":[0.996259,0.0002489455,0.00007313719,0.001881645,0.0002795943,0.00001240938,0.00002368371,0.000009119153,0.001212458],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3529203,"threshold_uncertainty_score":0.2570353,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03319652395387922,"score_gpt":0.2335650455428298,"score_spread":0.2003685215889506,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}