{"id":"W3044564071","doi":"10.3390/v12080797","title":"A Lactococcal Phage Protein Promotes Viral Propagation and Alters the Host Proteomic Response During Infection","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds de recherche du Québec – Nature et technologies; Novalait","keywords":"Lactococcus lactis; Biology; Proteome; Bacteriophage; Proteomics; Virulence; Microbiology; Bacteria; Lactococcus; Phage display; Strain (injury); Function (biology); Mutant; Computational biology; Lactic acid; Genetics; Escherichia coli; Gene; Antibody","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001251661,0.0002189325,0.000172514,0.0001476685,0.0001285042,0.0003506989,0.0001099421,0.0002216377,0.0006375518],"category_scores_gemma":[0.0001384821,0.00009889645,0.0001918108,0.00009856863,0.0001919379,0.0001605163,0.0002248025,0.0003596703,0.000219624],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002270139,"about_ca_system_score_gemma":0.0001649382,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006118681,"about_ca_topic_score_gemma":0.000598945,"domain_scores_codex":[0.9998795,0.00002219407,0.000006849094,0.00002115375,0.00002359313,0.00004677811],"domain_scores_gemma":[0.9998969,0.00002264149,0.00002160132,0.000008861934,0.00001211026,0.00003783691],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006963156,0.00001252613,0.0002094477,0.000006488725,0.000001673563,0.00001277759,0.00000967508,0.000012292,0.9994801,0.00001382903,0.00000716945,0.0001644799],"study_design_scores_gemma":[0.000006499318,0.0003695451,0.01796814,0.00000575397,0.000008626652,0.0001271373,0.0001010224,0.0009098792,0.9797142,0.00003921273,0.0007432265,0.000006692442],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9989163,0.0002445272,0.0004195423,0.00002108325,0.000006202632,0.000005740251,0.00006886276,0.00001411968,0.0003037492],"genre_scores_gemma":[0.9982223,0.000157221,0.0005121306,0.00003439107,0.000003401399,0.000009550474,0.000200545,0.00001170153,0.0008486591],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0006375518,"threshold_uncertainty_score":0.002132833,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0161464175028471,"score_gpt":0.2413791342516043,"score_spread":0.2252327167487572,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}