{"id":"W3044568586","doi":"10.1186/s12864-020-06905-3","title":"Molecular characterization of Pseudomonas from Agaricus bisporus caps reveal novel blotch pathogens in Western Europe","year":2020,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Fungal Biology and Applications","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Newfoundland and Labrador; Agriculture and Horticulture Development Board","keywords":"Biology; Agaricus bisporus; Microbiology; Virulence; Agaricus; Phylogenetic tree; Phylogenetics; Genetics; Mushroom; Gene; Botany","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002685466,0.0003335639,0.0001647371,0.001070714,0.0001838547,0.0005897442,0.000129231,0.000282678,0.000608422],"category_scores_gemma":[0.0002078736,0.00008137424,0.000211285,0.0008596093,0.0001940284,0.0003386151,0.0003040194,0.000171294,0.0001962474],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001633211,"about_ca_system_score_gemma":0.0002193736,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001832528,"about_ca_topic_score_gemma":0.001696888,"domain_scores_codex":[0.9997661,0.00002041658,0.00002002165,0.00009186466,0.00004833109,0.00005327794],"domain_scores_gemma":[0.9997664,0.00002805298,0.00008789866,0.00001361008,0.00006830615,0.00003563118],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0007051701,0.0001356223,0.2416458,0.0004081258,0.0001368721,0.001699131,0.0008241193,0.0004189953,0.6942571,0.0002301159,0.0003032156,0.05923578],"study_design_scores_gemma":[0.00001124961,0.0001854722,0.9706246,0.00004370484,0.00006879345,0.001393357,0.0007793825,0.000342947,0.02108146,0.00007672334,0.005384216,0.000008130387],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9951949,0.001595131,0.001191856,0.00004735144,0.000008963852,0.00002174222,0.0005897843,0.00001521382,0.001335029],"genre_scores_gemma":[0.9950848,0.001132823,0.001591511,0.00004896052,0.00001119686,0.00001178799,0.001464586,0.000007225754,0.0006470852],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001832528,"threshold_uncertainty_score":0.003643751,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02649042047452699,"score_gpt":0.2383138045507309,"score_spread":0.2118233840762039,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}