{"id":"W3047056154","doi":"10.1128/mra.00420-20","title":"Complete Genome Sequence of the Type Strain Pectobacterium punjabense SS95, Isolated from a Potato Plant with Blackleg Symptoms","year":2020,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Plant Pathogenic Bacteria Studies","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Grand Challenges Canada; Centre National de la Recherche Scientifique; Higher Education Commission, Pakistan; Agence Nationale de la Recherche","keywords":"Blackleg; Minion; Biology; Whole genome sequencing; Pectobacterium; Genome; Nanopore sequencing; Strain (injury); GC-content; Genetics; Botany; Gene; Brassica","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005144746,0.001356288,0.0011314,0.001576923,0.0008327343,0.0007863673,0.0006426491,0.0009364019,0.004028355],"category_scores_gemma":[0.0009633312,0.0004670693,0.0007717814,0.003982425,0.0004287547,0.0006491471,0.0006751009,0.001624249,0.003791384],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003675519,"about_ca_system_score_gemma":0.001714175,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004456576,"about_ca_topic_score_gemma":0.003558163,"domain_scores_codex":[0.9996111,0.00002969268,0.00004186564,0.000149898,0.0001109658,0.00005653794],"domain_scores_gemma":[0.9994572,0.0001163885,0.0001253234,0.00007306614,0.0001319807,0.00009602256],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001136406,0.0002583697,0.003596529,0.00193473,0.00008946604,0.0007534683,0.0005065216,0.0008199744,0.9577094,0.0005883744,0.007267152,0.02533959],"study_design_scores_gemma":[0.001096203,0.003045493,0.3237193,0.001084352,0.001409975,0.007082817,0.001686793,0.003963834,0.2422267,0.002424993,0.4117689,0.0004907012],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.399411,0.004397513,0.03651789,0.000703036,0.0007399364,0.001021286,0.5461872,0.001385945,0.009636243],"genre_scores_gemma":[0.171328,0.002696965,0.03826675,0.0002860142,0.00009352792,0.0006612472,0.7801759,0.0005480069,0.005943562],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.004456576,"threshold_uncertainty_score":0.01347619,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0276783915904339,"score_gpt":0.1908923767382256,"score_spread":0.1632139851477917,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}