{"id":"W3048832886","doi":"10.1101/2020.08.11.246777","title":"Genomically Complex Human Angiosarcoma and Canine Hemangiosarcoma Establish Convergent Angiogenic Transcriptional Programs Driven by Novel Gene Fusions","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Vascular Tumors and Angiosarcomas","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"York University","funders":"","keywords":"Fusion gene; Gene; Hemangiosarcoma; Transcriptome; Mutation; Angiosarcoma; Fusion protein; Oncogene Proteins","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003382893,0.00109243,0.001505913,0.0003342398,0.0004147488,0.0002772975,0.0006328044,0.0006308846,0.000212853],"category_scores_gemma":[0.00006158438,0.001156159,0.0009459127,0.0006005739,0.0003952791,0.0001482456,0.0007562637,0.00103562,0.00003425263],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003587571,"about_ca_system_score_gemma":0.000717552,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002339619,"about_ca_topic_score_gemma":0.00001671135,"domain_scores_codex":[0.995024,0.0001174649,0.0010648,0.001857253,0.0008831134,0.001053402],"domain_scores_gemma":[0.9963199,0.00003266089,0.0004325647,0.001298947,0.0005286863,0.001387169],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00007534456,0.0009570454,0.01877881,0.0005379889,0.0009947778,0.0003034243,0.00003177668,0.000005831536,0.974678,0.001554822,0.002077944,0.000004272129],"study_design_scores_gemma":[0.009869102,0.001092545,0.8067895,0.001258372,0.003110198,0.000007433071,0.00002537996,0.0032974,0.1115399,0.00001124677,0.0593534,0.003645549],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9848426,0.004781327,0.002245873,0.003132263,0.0004002473,0.002323169,0.001616489,0.0006449852,0.00001306731],"genre_scores_gemma":[0.9803824,0.0002798204,0.0167305,0.001042914,0.000821126,0.0002936643,0.0001128549,0.000317367,0.00001927805],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.863138,"threshold_uncertainty_score":0.9990888,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02935675837955012,"score_gpt":0.2319635183073676,"score_spread":0.2026067599278174,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}