{"id":"W3049509200","doi":"10.2217/epi-2019-0340","title":"The Relationship Between Colorectal Cancer Risk Factors and LINE-1 DNA Methylation in Healthy Colon Tissue","year":2020,"lang":"en","type":"article","venue":"Epigenomics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Queen's University","funders":"Canadian Institutes of Health Research","keywords":"DNA methylation; Colorectal cancer; Methylation; Epigenetics; Biology; Oncology; Internal medicine; Population; Cancer; Colonoscopy; Cancer research; Bioinformatics; DNA; Genetics; Medicine; Gene; Gene expression; Environmental health","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002052299,0.0001169578,0.0001530464,0.0004976751,0.0001158528,0.000204352,0.0001192576,0.0001846812,0.002250041],"category_scores_gemma":[0.0008570326,0.0001173483,0.000102008,0.0003986793,0.0001131446,0.0001494747,0.0001318062,0.0002166093,0.0002601066],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001059947,"about_ca_system_score_gemma":0.00008059811,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007558197,"about_ca_topic_score_gemma":0.0009815051,"domain_scores_codex":[0.9998589,0.00003702128,0.0000109407,0.00004750549,0.00002331018,0.00002231029],"domain_scores_gemma":[0.999364,0.0001980405,0.000283743,0.00003870919,0.00005937653,0.00005619979],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0009730771,0.00004372029,0.955093,0.00005231536,0.0001165358,0.0001070291,0.00007455834,0.00008016789,0.03566365,0.00002931683,0.0000745201,0.00769194],"study_design_scores_gemma":[0.000004953494,0.0002027804,0.9956167,0.000004103103,0.00003285246,0.0003051466,0.00003815349,0.0001323573,0.003379015,0.00003164483,0.000250202,0.000002157475],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974555,0.001294456,0.000401519,0.00003000954,0.000003450756,0.000005607736,0.0004238655,0.000008571293,0.000377021],"genre_scores_gemma":[0.9989843,0.0002548466,0.000236182,0.00001205639,0.00000427512,0.000004347686,0.0002630158,0.000002148958,0.0002387337],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002250041,"threshold_uncertainty_score":0.007527173,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03844530373417284,"score_gpt":0.3114475668558527,"score_spread":0.2730022631216799,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}