{"id":"W3049729174","doi":"10.1101/2020.08.17.254789","title":"UhAVR1, an HR-triggering avirulence effector of <i>Ustilago hordei</i> , is secreted via the ER-Golgi pathway to the cytosol of barley coleoptile cells and contributes to virulence early in infection","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Virulence; Effector; Smut; Nicotiana benthamiana; Microbiology; Hordeum vulgare; Agrobacterium; Pathogen; Gene; Cell biology; Genetics; Botany; Transgene; Poaceae","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006476867,0.0002612242,0.0001591193,0.0001255677,0.0001196103,0.0002019018,0.0001237229,0.0001754464,0.0007262598],"category_scores_gemma":[0.0000594841,0.000101172,0.000222935,0.00007092938,0.0001106549,0.0001102578,0.0001685208,0.000277303,0.0003704956],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002243682,"about_ca_system_score_gemma":0.00006839169,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004655074,"about_ca_topic_score_gemma":0.000586513,"domain_scores_codex":[0.9999369,0.000007106193,0.000004788604,0.00001522389,0.00001559703,0.00002030307],"domain_scores_gemma":[0.999928,0.00001214834,0.00002149406,0.00001047601,0.000009019602,0.00001879981],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000145583,0.000003465507,0.000113819,0.000006804683,6.244462e-7,0.00002018189,0.000004102531,0.000008203053,0.9996122,0.00001084432,0.000005779511,0.0001995432],"study_design_scores_gemma":[0.000004315144,0.0001392763,0.0148446,0.000002527527,0.00000542179,0.0003364085,0.0000254243,0.0004151413,0.9831157,0.00001766643,0.001090677,0.000002734103],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9964977,0.0003940397,0.00178851,0.00004209083,0.000008366016,0.00001132786,0.0002779818,0.00007608911,0.0009040555],"genre_scores_gemma":[0.995729,0.0001778759,0.001258514,0.00001989358,0.00000411433,0.000007584369,0.0008630194,0.00001829962,0.001921686],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0007262598,"threshold_uncertainty_score":0.002429545,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01228794988752355,"score_gpt":0.2028125658374902,"score_spread":0.1905246159499666,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}