{"id":"W3063941966","doi":"10.1128/mbio.01902-20","title":"Chlamydia trachomatis Plasmid Gene Protein 3 Is Essential for the Establishment of Persistent Infection and Associated Immunopathology","year":2020,"lang":"en","type":"article","venue":"mBio","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"Division of Intramural Research, National Institute of Allergy and Infectious Diseases","keywords":"Chlamydia trachomatis; Trachoma; Immunology; Tubal factor infertility; Chlamydia; Virulence; Plasmid; Biology; Infertility; Gene; Immunopathology; Chlamydiaceae; Medicine; Virology; Genetics; Pathology; Pregnancy","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003735218,0.0001095475,0.0002005412,0.00005999187,0.0002402363,0.00002027523,0.0001023985,0.000163837,0.0002302723],"category_scores_gemma":[0.0004982992,0.00008460391,0.0001417672,0.0001662487,0.000270267,0.00007853408,0.00007010828,0.0002453158,0.00003458694],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004512338,"about_ca_system_score_gemma":0.00004736353,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002541749,"about_ca_topic_score_gemma":0.0000138496,"domain_scores_codex":[0.9990457,0.0001794676,0.0002295558,0.000284163,0.00004275091,0.0002183724],"domain_scores_gemma":[0.999357,0.0001501806,0.0001236846,0.0001882832,0.0001642644,0.00001654225],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001994786,0.0002025068,0.006622456,0.00004088509,0.0005114297,6.755141e-7,0.001382612,0.00002666408,0.9854801,0.00007102401,0.001182927,0.004279196],"study_design_scores_gemma":[0.001448952,0.0007126166,0.0957564,0.0000126974,0.0001280399,0.00003814009,0.000185232,0.0001275829,0.8958304,0.00003981912,0.005599766,0.0001203572],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9940512,0.001373948,0.0006266117,0.00239693,0.0002482331,0.00106152,0.00009159604,0.00003613896,0.0001138203],"genre_scores_gemma":[0.9990373,0.0001099636,0.00006059431,0.00006950985,0.00003836758,0.0002017348,0.00005120895,0.00001231341,0.000418973],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08964974,"threshold_uncertainty_score":0.3450047,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02291623969456615,"score_gpt":0.2631274948589992,"score_spread":0.2402112551644331,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}