{"id":"W3080967255","doi":"10.1038/s42003-020-01162-2","title":"Ancient Jomon genome sequence analysis sheds light on migration patterns of early East Asian populations","year":2020,"lang":"en","type":"article","venue":"Communications Biology","topic":"Forensic and Genetic Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":115,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Japan Society for the Promotion of Science; Institute of Genetics; Lundbeckfonden; Ministry of Education, Culture, Sports, Science and Technology; Kanazawa University","keywords":"East Asia; Biological dispersal; Human migration; Geography; Evolutionary biology; Lineage (genetic); Indigenous; Middle East; Genome; Phylogenetic tree; Ancient DNA; Biology; Archaeology; Ecology; Demography; Population; Genetics; Gene; China","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001221846,0.0001005165,0.0001647906,0.0001079389,0.0001181148,0.00001113988,0.0006401588,0.0001220816,0.00004331539],"category_scores_gemma":[0.00008102492,0.00009279115,0.0001209477,0.0004072522,0.0001610689,0.000002887406,0.0002694151,0.0001099508,0.00001941833],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001282022,"about_ca_system_score_gemma":0.00005162164,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001061761,"about_ca_topic_score_gemma":0.0006049173,"domain_scores_codex":[0.9990315,0.0002010198,0.0002661048,0.0002591783,0.00007873716,0.000163425],"domain_scores_gemma":[0.9984511,0.00001042371,0.0001078237,0.001190641,0.0001487111,0.00009128253],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00005630603,0.0001584492,0.2117499,0.0000102538,0.0002652816,3.936703e-7,0.000774187,0.0003618278,0.7782385,0.004453845,0.0001976399,0.003733477],"study_design_scores_gemma":[0.0007590896,0.003716852,0.8525189,0.00001720782,0.0003375015,0.000005015389,0.0008286951,0.005612366,0.03773928,0.0004975976,0.09736978,0.0005977502],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9803929,0.0004988463,0.006996801,0.009857587,0.00003924869,0.0002083475,0.0002187406,0.00001194827,0.001775525],"genre_scores_gemma":[0.9957598,0.000248262,0.001507812,0.0003266418,0.00004347035,0.00002881186,0.001989868,0.000008360433,0.00008697098],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7404991,"threshold_uncertainty_score":0.3783913,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08633005338993478,"score_gpt":0.3506101260884353,"score_spread":0.2642800726985005,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}