{"id":"W3081040439","doi":"10.1200/jco.2009.27.15_suppl.4530","title":"Outcome prediction based on single nucleotide polymorphisms (SNPs) in DNA repair paths in patients (pts) with esophageal adenocarcinoma (EAC) treated with preoperative (preop) cisplatin (C)-based chemoradiation (CRT): Results from the Eastern Cooperative Oncology Group (ECOG)","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Oncology","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Princess Margaret Cancer Centre","funders":"","keywords":"Medicine; Gastroenterology; Single-nucleotide polymorphism; Internal medicine; Irinotecan; Esophageal cancer; Adenocarcinoma; Nuclear medicine; Cancer; Colorectal cancer; Genotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007414642,0.0002605953,0.0003567621,0.000188367,0.0001328215,0.0003123146,0.0001741128,0.0004584097,0.0007511811],"category_scores_gemma":[0.001237924,0.0001487863,0.0005623954,0.0002123702,0.0001848644,0.0002043609,0.000226618,0.0005222833,0.0001658252],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002121999,"about_ca_system_score_gemma":0.0001673135,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005127802,"about_ca_topic_score_gemma":0.0008873153,"domain_scores_codex":[0.9997318,0.0001242008,0.00002135243,0.00006366176,0.00002936255,0.00002967591],"domain_scores_gemma":[0.9991805,0.0003208097,0.0002387838,0.00003620686,0.00003901991,0.0001846146],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.05241083,0.001072909,0.9220511,0.00006609849,0.0004086797,0.00009303272,0.00007921401,0.001466633,0.006322898,0.00002683244,0.0003845904,0.01561715],"study_design_scores_gemma":[0.002269593,0.01922075,0.972383,0.00001438237,0.0005463166,0.0002139013,0.00006797213,0.00319553,0.001549619,0.0001163701,0.0004107842,0.00001179208],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9995821,0.0001493341,0.00005645802,0.00003103822,0.000003207095,0.000009947144,0.00008798821,0.000001529307,0.00007835864],"genre_scores_gemma":[0.9995998,0.00004438692,0.00006008357,0.00002680296,0.000006104567,0.00001115297,0.0001749642,7.501699e-7,0.00007600231],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0007511811,"threshold_uncertainty_score":0.00392127,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03095420599544157,"score_gpt":0.3104222838268247,"score_spread":0.2794680778313831,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}