{"id":"W3081061791","doi":"10.1101/2020.08.18.20172072","title":"Clinical and molecular heterogeneity of pineal parenchymal tumors: a consensus study","year":2020,"lang":"en","type":"preprint","venue":"medRxiv","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"American Lebanese Syrian Associated Charities; Canadian Cancer Society Research Institute; National Cancer Institute; Deutsche Kinderkrebsstiftung; St. Jude Children's Research Hospital; Memorial Sloan-Kettering Cancer Center","keywords":"Biology; DNA methylation; Internal medicine; Parenchyma; microRNA; Oncology; Cancer research; Gene; Bioinformatics; Computational biology; Pathology; Medicine; Gene expression; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.01685049,0.0009312641,0.005125873,0.005260019,0.0005211314,0.002325336,0.002348278,0.001244692,0.001899386],"category_scores_gemma":[0.02852902,0.0005614694,0.00734935,0.004653773,0.0007615954,0.001437099,0.001632441,0.0008487692,0.0003233375],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000871161,"about_ca_system_score_gemma":0.001596023,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00166797,"about_ca_topic_score_gemma":0.002135787,"domain_scores_codex":[0.990766,0.002526259,0.002704894,0.002733782,0.0009911887,0.0002778012],"domain_scores_gemma":[0.9647571,0.02032523,0.005128904,0.003982671,0.004969872,0.0008363149],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"qualitative","study_design_scores_codex":[0.004735562,0.00006237471,0.724149,0.02876623,0.1168168,0.001023671,0.0006053777,0.001704019,0.004856627,0.001005035,0.003687767,0.1125875],"study_design_scores_gemma":[0.001293613,0.001112423,0.7148442,0.0143149,0.2270164,0.006634824,0.002048989,0.003181284,0.002521852,0.005525225,0.02129404,0.0002121215],"study_design_candidate":"qualitative","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.5241134,0.4457797,0.01445967,0.002871439,0.0005893921,0.0005668359,0.008479917,0.000157659,0.002982075],"genre_scores_gemma":[0.9659323,0.02400769,0.003558066,0.0008045693,0.0002756522,0.0001984932,0.005041768,0.000061818,0.000119602],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01685049,"threshold_uncertainty_score":0.08911496,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07372931208739508,"score_gpt":0.368644240314314,"score_spread":0.2949149282269189,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}