{"id":"W3081845587","doi":"10.1139/gen-2019-0214","title":"Genetic diversity and ancestry of cacao (<i>Theobroma cacao</i> L.) in Dominica revealed by single nucleotide polymorphism markers","year":2020,"lang":"en","type":"article","venue":"Genome","topic":"Cocoa and Sweet Potato Agronomy","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Theobroma; Biology; Germplasm; Genetic diversity; Phylogenetic tree; Biotechnology; Botany; Genetics; Population; Gene","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002646498,0.0001826069,0.0002189213,0.001546487,0.0005236873,0.0005351107,0.0002666665,0.0001387186,0.0006331143],"category_scores_gemma":[0.0004420573,0.00008209747,0.0001191065,0.0008950369,0.0003276315,0.0001287881,0.0003036229,0.0001379711,0.00008458497],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007910369,"about_ca_system_score_gemma":0.0002862689,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.06563562,"about_ca_topic_score_gemma":0.1160387,"domain_scores_codex":[0.9998479,0.00001845089,0.000009136607,0.00006859975,0.00002341862,0.00003245947],"domain_scores_gemma":[0.9996855,0.00005957218,0.0001037903,0.00002213659,0.00005677125,0.00007228452],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003517063,0.000056669,0.8647934,0.00004372606,0.00009103426,0.0003741595,0.003515289,0.0001668798,0.1116712,0.0000988472,0.00009329053,0.01874364],"study_design_scores_gemma":[0.000004801124,0.00001635421,0.998877,0.000003650413,0.00001336995,0.00006178158,0.0003097395,0.0001110314,0.0003131716,0.00001012796,0.000276133,0.000002777607],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9997205,0.00004138657,0.00002618106,0.000003888547,1.894443e-7,0.000002712897,0.00005985228,0.00000169138,0.0001434286],"genre_scores_gemma":[0.9994833,0.00003693848,0.0001125473,0.000005323101,0.000001169872,0.000003609847,0.0001845309,0.000001505334,0.0001710215],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06563562,"threshold_uncertainty_score":0.1305072,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02284067217047967,"score_gpt":0.1864739325288129,"score_spread":0.1636332603583333,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}