{"id":"W3081922603","doi":"10.1093/ve/veaa069","title":"Discovery and surveillance of viruses from salmon in British Columbia using viral immune-response biomarkers, metatranscriptomics, and high-throughput RT-PCR","year":2020,"lang":"en","type":"article","venue":"Virus Evolution","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"Fisheries and Oceans Canada; University of British Columbia","funders":"Pacific Salmon Foundation","keywords":"Salmo; Biology; Oncorhynchus; Aquaculture; Chinook wind; Virus; Biosecurity; Trout; Virology; Fishery; Zoology; Ecology; Fish <Actinopterygii>","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002476301,0.0003205032,0.0001969417,0.0007443077,0.0005930691,0.0006539804,0.0002375882,0.0002608641,0.0004429515],"category_scores_gemma":[0.0003648373,0.0001841935,0.0001726104,0.0007904627,0.0002780636,0.000154992,0.0002653014,0.0003020203,0.0001214741],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001664786,"about_ca_system_score_gemma":0.001825193,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.4302956,"about_ca_topic_score_gemma":0.6953054,"domain_scores_codex":[0.9997451,0.00001620098,0.00001689307,0.00007768117,0.0001024312,0.00004178581],"domain_scores_gemma":[0.9995772,0.00005304634,0.00008771374,0.00001475182,0.0002254866,0.0000418035],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001514938,0.00004538427,0.410546,0.000153233,0.00004580189,0.0001459925,0.00052237,0.000578624,0.57474,0.0000500462,0.0002203132,0.01280071],"study_design_scores_gemma":[0.00000839218,0.0001979744,0.9592453,0.00002940525,0.00005010462,0.0001572794,0.001396077,0.002151138,0.03493633,0.00003432783,0.00177669,0.00001699448],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9966142,0.0003274354,0.0008361255,0.00003219016,0.000003510467,0.00005372875,0.001413169,0.00001869791,0.0007007894],"genre_scores_gemma":[0.991721,0.0004213676,0.003694581,0.00009956573,0.000002880667,0.00005057019,0.002177118,0.000009458604,0.001823488],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5697044,"threshold_uncertainty_score":0.855582,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02412790737188658,"score_gpt":0.2199066886849602,"score_spread":0.1957787813130737,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}