{"id":"W3082172890","doi":"10.1371/journal.pone.0238183","title":"Whole genome sequencing analysis of high confidence variants of B-cell lymphoma in Canis familiaris","year":2020,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Veterinary Oncology Research","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Ontario Centres of Excellence","keywords":"Lymphoma; Canine Lymphoma; Biology; Gene; CHOP; Cancer; Cancer research; Human genome; Genetics; Oncology; Genome; Immunology; Medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002442141,0.00009868913,0.0008124852,0.0003234844,0.00001583571,0.00000299584,0.0001785919,0.0001005406,0.0003559467],"category_scores_gemma":[0.0002113052,0.000100784,0.00007449894,0.001329856,0.0001205135,0.00005258457,0.000109444,0.0001401355,0.0000258785],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001904515,"about_ca_system_score_gemma":0.0003623498,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002331058,"about_ca_topic_score_gemma":0.0001037296,"domain_scores_codex":[0.9985453,0.00009943601,0.0004072049,0.0002719838,0.0004467095,0.0002293223],"domain_scores_gemma":[0.9991177,0.0001228906,0.000125465,0.000306042,0.0001823483,0.0001455636],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000264384,0.001020187,0.03655065,0.0004161296,0.001012254,0.0003230115,0.001109218,0.00004971047,0.9591829,0.00002015947,0.000006587958,0.00004485088],"study_design_scores_gemma":[0.004094052,0.002678567,0.8575928,0.0002201357,0.002627459,0.00001326096,0.0007150814,0.01398537,0.1178457,0.00003509842,0.00001546355,0.0001770604],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974232,0.000139061,0.00007810373,0.0009769979,0.00000722779,0.0002571817,0.00007907909,0.00001495454,0.001024187],"genre_scores_gemma":[0.9960476,0.00007100735,0.003235108,0.0002584293,0.00002535858,0.00001254028,0.00003539402,0.00001371205,0.0003008951],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8413372,"threshold_uncertainty_score":0.4109854,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.102903631593573,"score_gpt":0.2969773984652423,"score_spread":0.1940737668716693,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}