{"id":"W3082259198","doi":"10.1016/j.ijbiomac.2020.08.251","title":"Comparative genome-wide DNA methylation analysis reveals epigenomic differences in response to heat-humidity stress in Bombyx mori","year":2020,"lang":"en","type":"article","venue":"International Journal of Biological Macromolecules","topic":"Insect symbiosis and bacterial influences","field":"Agricultural and Biological Sciences","cited_by":21,"is_retracted":false,"has_abstract":false,"ca_institutions":"Ministry of Agriculture","funders":"Agriculture Research System of China; Fundamental Research Funds for the Central Universities; Natural Science Foundation of Chongqing; National Natural Science Foundation of China","keywords":"DNA methylation; Biology; Differentially methylated regions; Epigenetics; Genetics; Methylation; Epigenomics; Gene; Context (archaeology); Bisulfite sequencing; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005003529,0.0001457878,0.0001853342,0.000296746,0.0001624579,0.0001511896,0.0001052675,0.0001376212,0.0009130447],"category_scores_gemma":[0.00006161804,0.0001295368,0.0001829206,0.0001870877,0.0001089277,0.00008895589,0.000171024,0.0001937011,0.00009140461],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001780228,"about_ca_system_score_gemma":0.00007299996,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00375634,"about_ca_topic_score_gemma":0.007276671,"domain_scores_codex":[0.999954,0.000003157717,0.000001738795,0.00001929075,0.000008085622,0.00001363917],"domain_scores_gemma":[0.9999638,0.000004635599,0.00001394597,0.000002254061,0.000005619543,0.000009825504],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000227022,0.000007750129,0.005295621,0.000020576,0.00001923673,0.00001634752,0.00006006897,0.00002490534,0.9927625,0.00001780451,0.00002281331,0.00152527],"study_design_scores_gemma":[0.000008394613,0.0001263615,0.921218,0.000003968308,0.00005989072,0.0001036862,0.0001412327,0.0004153236,0.07714494,0.0000298672,0.0007401508,0.000008213347],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9988654,0.0004350169,0.000213863,0.00001565707,0.000002902496,0.000002502363,0.0002765783,0.000005659782,0.0001825479],"genre_scores_gemma":[0.9978589,0.0002629196,0.0002326242,0.00002642878,0.000002926661,0.00001095488,0.0005168469,0.000004660571,0.001083568],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00375634,"threshold_uncertainty_score":0.007468939,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05771820807438521,"score_gpt":0.2892899435786748,"score_spread":0.2315717355042896,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}