{"id":"W3082625691","doi":"10.1158/1557-3265.ovca19-a03","title":"Abstract A03: PrOTYPE (Predictor of high-grade-serous Ovarian carcinoma molecular subTYPE): The development and validation of a clinical-grade consensus classifier for the molecular subtypes of high-grade serous tubo-ovarian cancer","year":2020,"lang":"en","type":"article","venue":"Clinical Cancer Research","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Serous fluid; Oncology; Ovarian cancer; Ovarian carcinoma; Subtyping; Serous carcinoma; Internal medicine; Medicine; Serous ovarian cancer; Bioinformatics; Biology; Cancer","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004034384,0.0006661573,0.0005726126,0.001292764,0.0004192369,0.001128658,0.001036238,0.0007951054,0.001444654],"category_scores_gemma":[0.007066411,0.000155018,0.0008294378,0.0006187532,0.0002697141,0.0003476988,0.0008898379,0.0007200066,0.0008623185],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008826824,"about_ca_system_score_gemma":0.001674504,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01015032,"about_ca_topic_score_gemma":0.01243764,"domain_scores_codex":[0.9986318,0.000376268,0.0001498289,0.0003715146,0.0003455249,0.0001251082],"domain_scores_gemma":[0.9964389,0.001337753,0.0004712846,0.0004614222,0.0009169592,0.0003736825],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001403236,0.0003382579,0.9021056,0.0001350455,0.0004722374,0.0001144744,0.00007240241,0.02073955,0.005998265,0.0002428967,0.007362721,0.06101536],"study_design_scores_gemma":[0.0004694521,0.001111182,0.6409675,0.00008784512,0.0005206098,0.0005806307,0.000244283,0.3329197,0.01700905,0.001479811,0.004546412,0.00006346694],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"methods","genre_scores_codex":[0.9679734,0.000274484,0.01662887,0.0002978975,0.00004844315,0.0002805414,0.01243905,0.0005507116,0.001506657],"genre_scores_gemma":[0.9631728,0.00004843635,0.0143351,0.00009386524,0.00002459166,0.0001510121,0.02149672,0.00004565587,0.0006319044],"genre_candidate":"methods","genre_consensus":null,"teacher_disagreement_score":0.01015032,"threshold_uncertainty_score":0.02133614,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.2168650576470767,"score_gpt":0.4494716190603984,"score_spread":0.2326065614133217,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}