{"id":"W3083210401","doi":"10.1101/2020.09.02.20182097","title":"Protein and Microbial Biomarkers in Sputum Discern Acute and Latent Tuberculosis in Investigation of Pastoral Ethiopian Cohort","year":2020,"lang":"en","type":"preprint","venue":"medRxiv","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Food Inspection Agency","funders":"National Institutes of Health","keywords":"Sputum; Tuberculosis; Mycobacterium tuberculosis; Immunology; Medicine; Latent tuberculosis; Immune system; Respiratory tract; Microbiology; Biology; Internal medicine; Pathology; Respiratory system","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003363725,0.0003184759,0.0002654942,0.0007519474,0.0005954882,0.0007009656,0.0001644413,0.0002419577,0.0008390425],"category_scores_gemma":[0.0006089964,0.0002310991,0.00021413,0.0004702519,0.0001844105,0.0002339647,0.0003304201,0.0002512591,0.0001637546],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002161027,"about_ca_system_score_gemma":0.0001502095,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003279992,"about_ca_topic_score_gemma":0.00381893,"domain_scores_codex":[0.9998776,0.0000289258,0.00001418354,0.00003218546,0.00001747062,0.00002965548],"domain_scores_gemma":[0.999862,0.00001741066,0.00004646872,0.00001084052,0.00002861299,0.00003464213],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001797829,0.00005332461,0.995876,0.00002053411,0.00002710715,0.0002869335,0.0003212976,0.00001832359,0.001619429,0.00001729566,0.00007456219,0.001505488],"study_design_scores_gemma":[0.000004586064,0.0001551701,0.9965364,0.00002158205,0.00003664073,0.0007092425,0.001579386,0.000135436,0.0004039624,0.00002500853,0.0003889248,0.00000370281],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9993749,0.0002881128,0.00004667841,0.00001648566,0.000003572429,0.000005519763,0.0001307972,7.757742e-7,0.0001330745],"genre_scores_gemma":[0.9995199,0.0001006824,0.00008487669,0.00001789622,0.000003147671,0.000004912869,0.00008423867,5.242612e-7,0.0001838816],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003279992,"threshold_uncertainty_score":0.006521761,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02609106272697691,"score_gpt":0.280075026719109,"score_spread":0.2539839639921321,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}