{"id":"W3083740962","doi":"10.1158/1538-7445.am2020-1583","title":"Abstract 1583: The tumor immune microenvironment in early breast cancer progression","year":2020,"lang":"en","type":"article","venue":"Cancer Research","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"","keywords":"Tumor microenvironment; Ductal carcinoma; Mass cytometry; Immune system; Breast cancer; Cancer research; Cancer; Tumor progression; Pathology; Medicine; Biology; Immunology; Internal medicine; Phenotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002390278,0.0002047709,0.0002476424,0.0004984622,0.0001991034,0.0005663189,0.0001688083,0.0003628868,0.003541861],"category_scores_gemma":[0.0002605933,0.00009285345,0.0001546352,0.0002841311,0.0001749624,0.0002252503,0.000218688,0.0005249375,0.000891746],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003912048,"about_ca_system_score_gemma":0.0002750949,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005442356,"about_ca_topic_score_gemma":0.0004319919,"domain_scores_codex":[0.9998519,0.00002512037,0.00000922965,0.00003898913,0.00004175856,0.00003299388],"domain_scores_gemma":[0.9998808,0.00002100951,0.00003419888,0.000006729029,0.0000322444,0.00002492862],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006582129,0.0001337278,0.03558493,0.0002196341,0.00001830793,0.0002991704,0.00009786243,0.0002723378,0.9320422,0.0003054486,0.001242944,0.02912519],"study_design_scores_gemma":[0.00006084212,0.001086157,0.5114273,0.0001119461,0.00007862795,0.002670302,0.0004557362,0.004799651,0.4572599,0.0008118157,0.02121285,0.00002500525],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9848318,0.006434657,0.002459733,0.0003888183,0.00008826836,0.00006885265,0.000883651,0.0001343708,0.0047099],"genre_scores_gemma":[0.9931183,0.001091366,0.002334217,0.0002471417,0.00005711755,0.00006560831,0.0006283108,0.00002175765,0.002436209],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003541861,"threshold_uncertainty_score":0.01184869,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04268127745866636,"score_gpt":0.3378385062090489,"score_spread":0.2951572287503825,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}