{"id":"W3084305773","doi":"10.12688/wellcomeopenres.16259.1","title":"Baseline results of a living systematic review for COVID-19 funded research projects","year":2020,"lang":"en","type":"preprint","venue":"Wellcome Open Research","topic":"Academic Publishing and Open Access","field":"Decision Sciences","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Population and Public Health; Institute of Infection and Immunity; Canadian Institutes of Health Research","funders":"Congressionally Directed Medical Research Programs; Philippine Council for Health Research and Development; RIKEN; Science and Engineering Research Board; Canadian Institutes of Health Research; Qatar National Research Fund; National Institute of Food and Agriculture; Centers for Disease Control and Prevention; Ottawa Hospital Foundation; Consejo Nacional de Ciencia y Tecnología, Paraguay; Agence Française de Développement; Centre National pour la Recherche Scientifique et Technique; Fundação de Amparo à Pesquisa e Inovação do Espírito Santo; Elizabeth Blackwell Institute for Health Research, University of Bristol; Fundação de Amparo à Pesquisa do Estado da Bahia; New South Wales Government; Fundação de Amparo à Pesquisa e Inovação do Estado de Santa Catarina; Centre National de la Recherche Scientifique; Türkiye Bilimsel ve Teknolojik Araştırma Kurumu; Fundação de Amparo à Pesquisa do Estado do Rio Grande do Sul; Banco Bilbao Vizcaya Argentaria; Novo Nordisk; Fundação de Amparo à Pesquisa e ao Desenvolvimento Científico e Tecnológico do Maranhão; Biotechnology Industry Research Assistance Council; Bulgarian National Science Fund; Agence Nationale de Recherches sur le Sida et les Hépatites Virales; Fonds De La Recherche Scientifique - FNRS; Austrian Science Fund; Innovationsfonden; Agence Universitaire de la Francophonie; American Council of Learned Societies; Eesti Teadusagentuur; Royal Academy of Engineering; Fraunhofer-Gesellschaft; Coalition for Epidemic Preparedness Innovations; Partnership for Advanced Computing in Europe AISBL; Bundesministerium für Bildung und Forschung; Fundação de Amparo à Pesquisa do Estado de Minas Gerais; Indian Council of Social Science Research; U.S. Department of Agriculture; Bpifrance; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; European Commission; Department of Health, Social Services and Public Safety, UK Government; British Society for Antimicrobial Chemotherapy; Deutsche Forschungsgemeinschaft; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; Saskatchewan Health Research Foundation; National Institute for Health and Care Research; European and Developing Countries Clinical Trials Partnership; Fast Grants; Japan Agency for Medical Research and Development; Svenska Forskningsrådet Formas; University of Pittsburgh; International Development Research Centre; Leibniz-Gemeinschaft; Agence Nationale de la Recherche; Fundación BBVA; Sage Foundation; Australian Government; Science Foundation Ireland; Corporación de Fomento de la Producción; Department of Biotechnology, Ministry of Science and Technology, India; Consejo Nacional de Ciencia, Tecnología e Innovación Tecnológica; Vetenskapsrådet; University of Minnesota; UK Research and Innovation; Agencia Nacional de Investigación y Desarrollo; Irish Research Council; National Health and Medical Research Council; Fundação de Apoio à Pesquisa do Estado da Paraíba; Agenția Națională pentru Cercetare și Dezvoltare; Department for Environment, Food and Rural Affairs, UK Government; Government of Ontario; Fonds National de la Recherche Luxembourg; Fundação de Amparo à Pesquisa do Estado do Amazonas; Wellcome; Burnet Institute; CHIST-ERA; Vienna Science and Technology Fund; Consejo Nacional de Ciencia y Tecnología; Styrelsen för Internationellt Utvecklingssamarbete; Agency for Healthcare Research and Quality; International Growth Centre","keywords":"Preparedness; Coronavirus disease 2019 (COVID-19); Portfolio; Thematic analysis; Political science; Medicine; Business; Qualitative research; Sociology; Disease; Infectious disease (medical specialty); Social science","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaresearch","metaepi_narrow","scholarly_communication","open_science","research_integrity"],"consensus_categories":["metaresearch","open_science"],"category_scores_codex":[0.5099841,0.0005907681,0.004026343,0.002679512,0.001263809,0.009398211,0.04691316,0.0009684259,0.0007929319],"category_scores_gemma":[0.8569402,0.0004197149,0.0006023414,0.008642935,0.0008904539,0.001439277,0.04898955,0.007593174,0.0007367829],"about_ca_system_candidate":true,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009380835,"about_ca_system_score_gemma":0.01107675,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.007097362,"about_ca_topic_score_gemma":0.0004229613,"domain_scores_codex":[0.9135941,0.04580829,0.008551329,0.005950847,0.02332911,0.002766347],"domain_scores_gemma":[0.677699,0.2868023,0.003996059,0.01095645,0.01766534,0.002880949],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"systematic_review","study_design_scores_codex":[0.0004894615,0.0001540945,0.00007478663,0.2515186,0.000107742,0.00003104023,0.001539692,0.00004231062,0.00002368076,0.00187109,0.7436906,0.0004569223],"study_design_scores_gemma":[0.002062098,0.00091867,0.00007443732,0.7166226,0.0002440031,0.00003320127,0.01185829,0.01882539,0.000224612,0.1020829,0.1455151,0.001538717],"study_design_candidate":"systematic_review","study_design_consensus":null,"genre_codex":"commentary","genre_gemma":"empirical","genre_scores_codex":[0.0008212566,0.101101,0.01290709,0.4720942,0.002493855,0.1852276,0.007561524,0.0003769559,0.2174165],"genre_scores_gemma":[0.6367727,0.04169742,0.01644551,0.01400807,0.003034421,0.03938599,0.001209332,0.0007088091,0.2467377],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.6359515,"threshold_uncertainty_score":0.9998255,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.7807368862207258,"score_gpt":0.6296889478232702,"score_spread":0.1510479383974556,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). 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