{"id":"W3085186554","doi":"10.1186/s12863-020-00912-9","title":"Pedigree analysis of pre-breeding efforts in Trifolium spp. germplasm in New Zealand","year":2020,"lang":"en","type":"article","venue":"BMC Genetics","topic":"Ruminant Nutrition and Digestive Physiology","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"AgResearch","keywords":"Germplasm; Biology; Trifolium repens; Trifolium subterraneum; Population; Forage; Agronomy; Plant breeding; Pasture; Demography","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006342536,0.00008311706,0.0002598287,0.00004255304,0.00001384688,0.000008663683,0.0001276429,0.00007044613,0.0001212499],"category_scores_gemma":[0.00004643118,0.0000387581,0.00008591205,0.001010919,0.00002594103,0.0000227111,0.00004475547,0.00006071513,0.000005617354],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007869107,"about_ca_system_score_gemma":0.00001450242,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003448369,"about_ca_topic_score_gemma":0.005011227,"domain_scores_codex":[0.9992398,0.00003967656,0.0002525343,0.0002016559,0.00009667208,0.0001696364],"domain_scores_gemma":[0.9996673,0.0001147928,0.00007307975,0.00003162268,0.00002075018,0.00009244819],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00008390061,0.0000515403,0.9210725,0.000006893451,0.00001061279,0.00000247691,0.0001348096,0.0005427679,0.07600106,0.00003245656,0.0005310918,0.001529933],"study_design_scores_gemma":[0.0002598136,0.0002253321,0.9938473,0.000008033487,0.00003252878,4.233525e-7,0.00005813899,0.001305081,0.001906303,0.0001416252,0.002130617,0.00008478342],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9989087,0.0001666392,0.000008332372,0.0005576484,0.000027878,0.0001080315,0.00001909787,0.000008914262,0.0001947319],"genre_scores_gemma":[0.9993586,0.0001127327,0.0001590611,0.0001216404,0.0001023757,0.000002555258,0.00002876612,5.68128e-7,0.0001136978],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07409475,"threshold_uncertainty_score":0.2796382,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04804555901177001,"score_gpt":0.2547752970932003,"score_spread":0.2067297380814303,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}