{"id":"W3085918855","doi":"10.3390/vaccines8030538","title":"Recognition of Dimeric Lewis X by Anti-Dimeric Lex Antibody SH2","year":2020,"lang":"en","type":"article","venue":"Vaccines","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"Simon Fraser University; University of Guelph; Canada Research Chairs; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Epitope; Glycoconjugate; Monoclonal antibody; Chemistry; Conformational epitope; Antigen; Trisaccharide; Antibody; Molecular biology; Context (archaeology); Epitope mapping; Mimotope; Biochemistry; Stereochemistry; Biology; Immunology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000646735,0.000107444,0.0001442305,0.00003726771,0.00004061077,0.000014413,0.0001353708,0.00008307564,0.000259331],"category_scores_gemma":[0.0001447863,0.00009878135,0.00006631867,0.0002595142,0.0000222542,0.00000600294,0.00007055357,0.00006595268,0.00007096834],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000002644786,"about_ca_system_score_gemma":0.00003144076,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005305435,"about_ca_topic_score_gemma":0.000002649589,"domain_scores_codex":[0.9992265,0.00004740326,0.0001815358,0.0002520488,0.0001280401,0.0001644522],"domain_scores_gemma":[0.9995384,0.000007662715,0.00007202737,0.0001603521,0.0001333946,0.00008817753],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007793756,0.00004318087,0.004367909,0.00003681871,0.00002792929,0.000001181591,0.00002078497,0.000008173572,0.9672767,0.000001861885,0.01708849,0.01104906],"study_design_scores_gemma":[0.0006500873,0.0004457163,0.007779661,0.000009953034,0.00001237158,0.000004509284,0.0000446814,0.0002700929,0.8808845,0.00001408811,0.1097096,0.0001746722],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9953137,0.001183787,0.001186683,0.001147161,0.00007934973,0.0001896522,0.00003156258,0.00001826051,0.0008498186],"genre_scores_gemma":[0.9976071,0.0004979623,0.000279541,0.0003402756,0.0001408808,0.000009039227,0.0005782436,0.00001797123,0.0005290002],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09262113,"threshold_uncertainty_score":0.4028187,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02167711779704112,"score_gpt":0.2880698873835906,"score_spread":0.2663927695865494,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}