{"id":"W3086615849","doi":"10.17504/protocols.io.bj9hkr36","title":"nCoV-2019 McGill Artic PCR Protocol, 5 ul RT and V3 only at 63C v1","year":2020,"lang":"en","type":"preprint","venue":"","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; McGill Genome Centre","funders":"","keywords":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); 2019-20 coronavirus outbreak; Primer (cosmetics); Protocol (science); Computer science; Computational biology; Biology; Virology; Medicine; Chemistry; Internal medicine; Pathology; Outbreak","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003217204,0.003844459,0.004342289,0.00383537,0.003422411,0.002888917,0.005311968,0.003245957,0.1425853],"category_scores_gemma":[0.00538081,0.005161217,0.002459045,0.002309877,0.002162259,0.00181816,0.002947145,0.006218967,0.139996],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001901837,"about_ca_system_score_gemma":0.005848838,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.006878828,"about_ca_topic_score_gemma":0.01785518,"domain_scores_codex":[0.9952472,0.0008988028,0.0004382402,0.00145834,0.001174998,0.0007823264],"domain_scores_gemma":[0.9980944,0.0004989576,0.0001189727,0.000729909,0.0003817488,0.0001760193],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001430799,0.0006572038,0.001731473,0.004049346,0.0001524046,0.0004793454,0.0008163137,0.00109657,0.5359281,0.01446862,0.3776004,0.06158929],"study_design_scores_gemma":[0.0002350173,0.0004495642,0.002868688,0.000581675,0.0002018776,0.0008348541,0.0001466784,0.002748059,0.1835101,0.004305857,0.8038818,0.0002358633],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"protocol","genre_scores_codex":[0.0263952,0.009972032,0.5192729,0.003487591,0.005090728,0.01559489,0.2208671,0.05285029,0.1464693],"genre_scores_gemma":[0.03557432,0.003393958,0.3076648,0.003129733,0.0005130763,0.01692265,0.4145903,0.02077094,0.1974402],"genre_candidate":"protocol","genre_consensus":null,"teacher_disagreement_score":0.1425853,"threshold_uncertainty_score":0.4769955,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0551868277716472,"score_gpt":0.3467448526926553,"score_spread":0.2915580249210081,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}