{"id":"W3087404059","doi":"10.1186/s12985-020-01408-9","title":"Role of HVR1 sequence similarity in the cross-genotypic neutralization of HCV","year":2020,"lang":"en","type":"article","venue":"Virology Journal","topic":"Hepatitis C virus research","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Toronto General Hospital; University of Toronto","funders":"","keywords":"Neutralization; Immunogen; Virology; Epitope; Biology; Antibody; Neutralizing antibody; Immunology; Virus; Monoclonal antibody","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000637517,0.00006043234,0.0002138783,0.0000901567,0.00004316302,0.000008180075,0.0002019151,0.0001049845,0.0002639037],"category_scores_gemma":[0.0004845497,0.00004270859,0.00005570547,0.0002751612,0.0002309842,0.00007150996,0.00003254661,0.0005685259,0.000009776235],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000234853,"about_ca_system_score_gemma":0.0001761614,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007036937,"about_ca_topic_score_gemma":0.00004736335,"domain_scores_codex":[0.9988053,0.000278298,0.0003601382,0.00009664396,0.0002759007,0.0001836784],"domain_scores_gemma":[0.9994358,0.0000886132,0.0001256569,0.0001291013,0.0001369629,0.00008389693],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003217748,0.00008067494,0.8119297,0.00004071862,0.00002412482,0.00008447992,0.001893747,0.0002487882,0.1803069,0.000413648,0.0001482885,0.004507132],"study_design_scores_gemma":[0.001320834,0.0008805554,0.977684,0.00002489839,0.00002616571,0.0001244269,0.0001345377,0.003707501,0.01140539,0.001416796,0.003223253,0.00005166811],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9929358,0.0002697233,0.000232687,0.004851705,0.00002618121,0.0001342412,0.000008622484,0.000004035189,0.001537056],"genre_scores_gemma":[0.9981248,0.0002310742,0.0001777138,0.001354797,0.00009197255,0.00000214709,0.000003320696,0.000006829162,0.000007320871],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1689015,"threshold_uncertainty_score":0.288956,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08474914489083574,"score_gpt":0.3864984458268955,"score_spread":0.3017493009360597,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}