{"id":"W3087554412","doi":"10.1186/s12862-020-01683-8","title":"Complete mitochondrial genome of Iniistius trivittatus and unique variation in two observed inserts between rRNA and tRNA genes in wrasses","year":2020,"lang":"en","type":"article","venue":"BMC Evolutionary Biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ministry of Agriculture","funders":"Central Public-interest Scientific Institution Basal Research Fund, Chinese Academy of Fishery Sciences; National Natural Science Foundation of China","keywords":"Biology; Genetics; Retrotransposon; Mitochondrial DNA; Transfer RNA; Ribosomal RNA; Evolutionary biology; Genome; Gene; Intergenic region; Phylogenetic tree; Heteroplasmy; RNA; Transposable element","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009332012,0.0001424457,0.0002913899,0.00006646342,0.00003737227,0.000004027317,0.0000955695,0.0001261574,0.000002271859],"category_scores_gemma":[0.0001136431,0.0001425679,0.0000327753,0.0001090356,0.0001469915,0.000001868119,0.0001793134,0.00006894251,4.113034e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000138471,"about_ca_system_score_gemma":0.00007738353,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003541672,"about_ca_topic_score_gemma":0.0005865361,"domain_scores_codex":[0.9988796,0.0001959735,0.0003397333,0.0003645263,0.00003672182,0.0001834162],"domain_scores_gemma":[0.9995934,0.00008438098,0.0001084194,0.0001119908,0.00004261628,0.00005921754],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001186311,0.0000160063,0.4533441,0.00001963244,0.00002002465,7.263983e-7,0.00008336358,0.0000994061,0.5459566,0.0001736813,0.000006329258,0.0001615126],"study_design_scores_gemma":[0.001600348,0.0003764529,0.9928403,0.000006200529,0.00001321545,0.000004769293,0.00003694799,0.0002483582,0.001776824,0.0009681744,0.001975683,0.0001527357],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9908485,0.007508195,0.0008931837,0.0002067577,0.00007353986,0.0002510054,0.0001793541,0.000002629468,0.00003687566],"genre_scores_gemma":[0.9942816,0.001000468,0.004210565,0.00008181873,0.0002144811,0.00002181193,0.0001745091,0.000009867737,0.000004877477],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5441797,"threshold_uncertainty_score":0.5813752,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05041267621029532,"score_gpt":0.2697340978159841,"score_spread":0.2193214216056888,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}