{"id":"W3088206288","doi":"10.1139/gen-2020-0067","title":"Transcriptome-wide identification, characterization, and phylogenomic analysis of cytochrome P450s from <i>Nothapodytes nimmoniana</i> reveal candidate genes involved in the camptothecin biosynthetic pathway","year":2020,"lang":"en","type":"article","venue":"Genome","topic":"Phytochemistry and Biological Activities","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Savitribai Phule Pune University","keywords":"Biology; Camptothecin; Cytochrome P450; Transcriptome; Gene; Cytochrome; Biochemistry; Genetics; Gene expression; Enzyme","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006216534,0.0002362684,0.0002312012,0.0003411674,0.0002548742,0.0002263398,0.00009604177,0.0001688402,0.0004400881],"category_scores_gemma":[0.00009761882,0.0001132945,0.0003246333,0.0003238357,0.0001036091,0.0001622389,0.0001859628,0.0003262612,0.0001735575],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002207993,"about_ca_system_score_gemma":0.000219508,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001660066,"about_ca_topic_score_gemma":0.002958782,"domain_scores_codex":[0.9999189,0.000005378333,0.000005535275,0.00003600336,0.00001873803,0.0000154772],"domain_scores_gemma":[0.9999278,0.00001011336,0.00002384716,0.000006388654,0.00001544922,0.00001644992],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00004315716,0.000008555282,0.002512897,0.00002226584,0.000005974167,0.00002974703,0.00002551749,0.00003014447,0.9955685,0.00002488448,0.0000340408,0.001694463],"study_design_scores_gemma":[0.00002377691,0.0003181722,0.7317118,0.0000208687,0.0001377621,0.0007679869,0.0003076619,0.003955958,0.2529661,0.0001987176,0.009570097,0.00002118517],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9931853,0.0007050812,0.002097019,0.00007427504,0.000007481666,0.00002830755,0.00306447,0.00005293068,0.0007850513],"genre_scores_gemma":[0.9769757,0.0008380748,0.004847674,0.0001169991,0.00001531746,0.00007565034,0.01412968,0.00004257228,0.002958335],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001660066,"threshold_uncertainty_score":0.003300786,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01765782001144543,"score_gpt":0.191102480601016,"score_spread":0.1734446605895706,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}