{"id":"W3088813247","doi":"10.3390/v12101096","title":"Chicken Astrovirus (CAstV) Molecular Studies Reveal Evidence of Multiple Past Recombination Events in Sequences Originated from Clinical Samples of White Chick Syndrome (WCS) in Western Canada","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":36,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; University of Guelph; University of Calgary","funders":"Mitacs; Alberta Agriculture and Forestry","keywords":"Biology; GenBank; Recombination; Genetics; Phylogenetic tree; Astrovirus; Genome; Whole genome sequencing; Virology; Gene; Virus; Norovirus","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000542301,0.0001876736,0.0006391173,0.00003631811,0.00006542274,0.000008366687,0.0004414904,0.00007676407,0.00002237717],"category_scores_gemma":[0.001755912,0.00009113974,0.00006457522,0.0006453059,0.0001617371,0.000242089,0.0003126885,0.0002326586,0.000003777782],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008097694,"about_ca_system_score_gemma":0.00008846493,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.3396224,"about_ca_topic_score_gemma":0.6598897,"domain_scores_codex":[0.9974321,0.0005411096,0.0008255281,0.0003827861,0.0005154972,0.0003030375],"domain_scores_gemma":[0.9976507,0.00174003,0.0003149632,0.00007364138,0.000124461,0.00009619055],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001699482,0.0000783588,0.8619251,0.00004456317,0.00005793879,0.00004362223,0.0002503764,0.00006139761,0.1361434,0.000001717608,0.00007997029,0.001143589],"study_design_scores_gemma":[0.0003484307,0.0004741002,0.9861878,0.000572695,0.00001042552,0.000001388103,0.0007157932,0.00004107751,0.01118644,0.0000665495,0.0002392559,0.0001560422],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960528,0.001666635,9.5684e-7,0.001144701,0.00008158853,0.0003118681,0.0007225578,0.00001545008,0.000003440888],"genre_scores_gemma":[0.9984447,0.001135224,0.00009962574,0.0002221576,0.00003338298,0.00002126975,0.00003601182,0.000001750678,0.000005822679],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3202673,"threshold_uncertainty_score":0.6647751,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1861415004190927,"score_gpt":0.3575254430895864,"score_spread":0.1713839426704937,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}