{"id":"W3089751495","doi":"10.1101/2020.10.02.322479","title":"Two independent approaches converge to the cloning of a new <i>Leptosphaeria maculans</i> avirulence effector gene, <i>AvrLmS-Lep2</i>","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba; Agriculture and Agri-Food Canada","funders":"","keywords":"Leptosphaeria maculans; Biology; Blackleg; Genetics; Virulence; Gene; Bulked segregant analysis; Effector; R gene; Complementation; Cloning (programming); Plant disease resistance; Phenotype; Gene mapping; Brassica; Botany; Chromosome; Cell biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006491186,0.0008634108,0.0008855062,0.0007316651,0.0002377203,0.001130551,0.0008535546,0.0006792403,0.001628212],"category_scores_gemma":[0.000648351,0.0005407412,0.001369102,0.0003199744,0.0006154114,0.0004530296,0.001506574,0.002636434,0.001803667],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005373757,"about_ca_system_score_gemma":0.0005356266,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000545935,"about_ca_topic_score_gemma":0.0005440834,"domain_scores_codex":[0.9993582,0.00009476072,0.00008512867,0.0001844253,0.0001507262,0.000126718],"domain_scores_gemma":[0.9990313,0.0002659387,0.0001628254,0.0001821055,0.0001514087,0.0002065225],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001291357,0.00006405415,0.0006015723,0.0001058144,0.00002791657,0.0001638189,0.00008341903,0.000137639,0.9927385,0.0008830962,0.00008996957,0.004975121],"study_design_scores_gemma":[0.00005365742,0.000361022,0.005488986,0.00002958666,0.000106362,0.001031747,0.0001187572,0.002097649,0.9799661,0.0005743229,0.01013213,0.00003969704],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7432523,0.001953334,0.2434378,0.001170837,0.0003686349,0.001231177,0.001184593,0.0008558121,0.006545518],"genre_scores_gemma":[0.7747332,0.001248256,0.204665,0.0006046732,0.0001318511,0.00086312,0.00559561,0.0003784405,0.01177974],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001628212,"threshold_uncertainty_score":0.005446911,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03318322697319612,"score_gpt":0.216904084638425,"score_spread":0.1837208576652289,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}