{"id":"W3090476780","doi":"10.1101/2020.10.05.327163","title":"Translational activity is uncoupled from nucleic acid content in bacterial cells of the human gut microbiota","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill Genome Centre; McGill University","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canadian Institute for Advanced Research","keywords":"Gut flora; Nucleic acid; Biology; Microbiome; Bacteria; Human microbiome; Metagenomics; Bacterial genome size; Microbiology; Biochemistry; Genetics; Gene; Genome","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002923244,0.0002539391,0.0002765927,0.0002855383,0.000178323,0.0003627233,0.0001102654,0.000313202,0.0008824479],"category_scores_gemma":[0.0003839501,0.0001738701,0.0001833844,0.000219229,0.0003245806,0.0001622402,0.0003927265,0.000306603,0.0002351071],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001474583,"about_ca_system_score_gemma":0.0001357813,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005502444,"about_ca_topic_score_gemma":0.0005338742,"domain_scores_codex":[0.9997098,0.00006952292,0.00001768993,0.00008229648,0.00007778459,0.00004294337],"domain_scores_gemma":[0.9997504,0.00004939315,0.00007863092,0.00002135262,0.00005142603,0.00004868789],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001528509,0.00001139272,0.003496696,0.00002584501,0.000007521463,0.00001018758,0.0000239437,0.00004792183,0.9950605,0.00002252961,0.0000124256,0.00112814],"study_design_scores_gemma":[0.00001346606,0.0007471025,0.1267261,0.00001998652,0.00004526268,0.0003381522,0.0002283152,0.003003989,0.8675478,0.0002048682,0.001108051,0.00001681244],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.996743,0.0003486597,0.002370377,0.00003690739,0.000009965874,0.00001042615,0.0002120166,0.00002243656,0.0002462381],"genre_scores_gemma":[0.9971707,0.0001626471,0.001925438,0.0000440836,0.000005315471,0.00001994402,0.0003564557,0.00001166405,0.0003036626],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008824479,"threshold_uncertainty_score":0.002952099,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02272765097918344,"score_gpt":0.2285452049866847,"score_spread":0.2058175540075013,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}