{"id":"W3091215959","doi":"10.1094/mpmi-04-20-0085-a","title":"Genome Sequence Resource for the Ramie Oomycete Pathogen <i>Phytopythium vexans</i> HF1","year":2020,"lang":"en","type":"article","venue":"Molecular Plant-Microbe Interactions","topic":"Plant Pathogens and Resistance","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"Agricultural Science and Technology Innovation Program; Chinese Academy of Agricultural Sciences; Natural Science Foundation of Hainan Province","keywords":"Oomycete; Biology; Genome; Whole genome sequencing; Contig; Genetics; Gene; Pathosystem","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000733741,0.00153918,0.001980045,0.003432294,0.00160218,0.00128707,0.001600669,0.001512214,0.02351145],"category_scores_gemma":[0.001247856,0.0008392847,0.0009283605,0.008836628,0.0002566707,0.0009085978,0.0009799514,0.002095682,0.02215513],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008818032,"about_ca_system_score_gemma":0.002843463,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009715649,"about_ca_topic_score_gemma":0.01139881,"domain_scores_codex":[0.9996737,0.00003539248,0.00004381129,0.00009997955,0.00009120083,0.00005592642],"domain_scores_gemma":[0.9993606,0.000132901,0.0001247628,0.00006239736,0.0001769618,0.0001424978],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.004596494,0.0008274,0.005952394,0.01131217,0.0004107388,0.001549692,0.001250163,0.003348962,0.5979833,0.004765267,0.2800841,0.08791933],"study_design_scores_gemma":[0.001238407,0.0006259434,0.05484752,0.001242606,0.0006318887,0.001699701,0.0003690931,0.007056098,0.02921713,0.002168378,0.9005626,0.0003405217],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.02687815,0.002068233,0.01424726,0.0003833699,0.0002393624,0.0005644666,0.9449392,0.00329544,0.007384502],"genre_scores_gemma":[0.004839751,0.0005542632,0.01056926,0.00004913276,0.00002725914,0.0002683268,0.9820552,0.0003596335,0.001277187],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.02351145,"threshold_uncertainty_score":0.07865357,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02970054465926712,"score_gpt":0.2206938080322858,"score_spread":0.1909932633730187,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}