{"id":"W3091215959","doi":"10.1094/mpmi-04-20-0085-a","title":"Genome Sequence Resource for the Ramie Oomycete Pathogen <i>Phytopythium vexans</i> HF1","year":2020,"lang":"en","type":"article","venue":"Molecular Plant-Microbe Interactions","topic":"Plant Pathogens and Resistance","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"Agricultural Science and Technology Innovation Program; Chinese Academy of Agricultural Sciences; Natural Science Foundation of Hainan Province","keywords":"Oomycete; Biology; Genome; Whole genome sequencing; Contig; Genetics; Gene; Pathosystem","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001185751,0.0002073858,0.0001929257,0.00001034664,0.000493218,0.0001320994,0.0004846073,0.00007938096,0.000119236],"category_scores_gemma":[0.00006959734,0.00008227373,0.0002307918,0.0002399863,0.0000637438,0.00008651496,0.00009306282,0.0002544603,0.00006824162],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002951976,"about_ca_system_score_gemma":0.00001464716,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002905248,"about_ca_topic_score_gemma":0.0001458438,"domain_scores_codex":[0.9987194,0.00007767491,0.0002580218,0.0004229032,0.0001500669,0.0003719603],"domain_scores_gemma":[0.9991851,0.0003720231,0.0001244004,0.0001170416,0.0000619824,0.0001394558],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00007688433,0.00002543263,0.00002927513,0.00001036134,0.0000401905,0.0000686703,0.00005927318,0.0001100176,0.9938574,0.0001167099,0.004303052,0.001302664],"study_design_scores_gemma":[0.0001192553,0.00009130604,0.0009891273,0.0000256798,0.00004869842,0.0001499443,0.0001942711,0.0004078229,0.0596033,0.00003762435,0.9380996,0.0002334168],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9286227,0.002251372,0.004525973,0.03744359,0.0008616633,0.001643019,0.02157693,0.0003490035,0.002725704],"genre_scores_gemma":[0.9873527,0.0001486203,0.0005979736,0.00826778,0.000619619,0.0001208203,0.001838092,0.000006930918,0.001047493],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9342542,"threshold_uncertainty_score":0.3793484,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02970054465926712,"score_gpt":0.2206938080322858,"score_spread":0.1909932633730187,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}