{"id":"W3091859163","doi":"10.1097/olq.0000000000001316","title":"Using Epidemiology, Immunology, and Genomics to Study the Biology of Chlamydia trachomatis","year":2020,"lang":"en","type":"article","venue":"Sexually Transmitted Diseases","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Centre for Disease Control","funders":"","keywords":"Chlamydia trachomatis; Biology; Genomics; Immunology; Infectious disease (medical specialty); Immunity; Immune system; Antigen; Virology; Chlamydia; Genome; Disease; Genetics; Gene; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003056937,0.0004490021,0.0004153277,0.001390323,0.0007964161,0.002060275,0.0005038088,0.001126526,0.002538023],"category_scores_gemma":[0.002535309,0.0002734118,0.0004868699,0.0009787313,0.001803619,0.00259866,0.00152565,0.002525277,0.0003247187],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001107595,"about_ca_system_score_gemma":0.001715354,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002775033,"about_ca_topic_score_gemma":0.002797484,"domain_scores_codex":[0.9993417,0.0003557525,0.00003305869,0.0001047122,0.00009198361,0.0000728637],"domain_scores_gemma":[0.997157,0.001601097,0.000381139,0.0001906661,0.0002881002,0.0003820193],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"observational","study_design_scores_codex":[0.0003815105,0.0006205994,0.2232776,0.002731011,0.0008785405,0.0008191554,0.004331406,0.005721157,0.1092204,0.1684343,0.04899055,0.4345938],"study_design_scores_gemma":[0.0000958876,0.001250851,0.305304,0.002350569,0.0005972891,0.002609553,0.008037077,0.0124756,0.03366891,0.2510184,0.3822944,0.0002974507],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.3407876,0.1669358,0.1286585,0.2890381,0.005759908,0.0004138907,0.001822334,0.0007986506,0.06578512],"genre_scores_gemma":[0.7403719,0.08083889,0.1198775,0.0393226,0.005250123,0.0004517232,0.00051559,0.0001309635,0.01324078],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003056937,"threshold_uncertainty_score":0.01616687,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08427765085162867,"score_gpt":0.3571599074048358,"score_spread":0.2728822565532072,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}