{"id":"W3092199848","doi":"10.1128/mbio.02033-20","title":"The Glycoprotease CpaA Secreted by Medically Relevant Acinetobacter Species Targets Multiple <i>O</i> -Linked Host Glycoproteins","year":2020,"lang":"en","type":"article","venue":"mBio","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":57,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Victoria","funders":"National Institute of General Medical Sciences; Medical Research Council; Canadian Institutes of Health Research; Washington University School of Medicine in St. Louis; National Institute of Allergy and Infectious Diseases; National Health and Medical Research Council; Government of Canada","keywords":"Glycoprotein; Host (biology); Biology; Acinetobacter; Computational biology; Microbiology; Virology; Genetics; Antibiotics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001938733,0.0003046405,0.0002518777,0.00001169309,0.0002671886,0.0001092386,0.0005899496,0.0002587908,0.000142018],"category_scores_gemma":[0.0009545601,0.0002190731,0.0001438847,0.0001254061,0.0003517623,0.000007772309,0.0002476625,0.000247119,0.0001109461],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002413184,"about_ca_system_score_gemma":0.0001098146,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002708596,"about_ca_topic_score_gemma":0.00006034436,"domain_scores_codex":[0.9980468,0.0001104662,0.0004197224,0.0005900805,0.0003217932,0.0005111088],"domain_scores_gemma":[0.9987531,0.00004757927,0.0001757962,0.0006024564,0.0001137118,0.0003073924],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0005730456,0.0000354361,0.005145765,0.00002512109,0.00007000174,0.00001736308,0.0000629826,4.680131e-7,0.923915,0.00002550916,0.06972419,0.0004051654],"study_design_scores_gemma":[0.0009645384,0.0003204714,0.005364267,0.00002168294,0.0000183632,0.000008659512,0.00009838829,0.00007901128,0.354554,0.00001400929,0.6382575,0.0002990928],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9847537,0.00155801,0.002552126,0.008604527,0.0004352104,0.0007904713,0.0002413233,0.00007396815,0.0009906258],"genre_scores_gemma":[0.9921462,0.0005109477,0.0009392494,0.002453689,0.0006676232,0.0000280893,0.0004455768,0.00005637883,0.002752276],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.569361,"threshold_uncertainty_score":0.8933541,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008729843287922612,"score_gpt":0.2084300091327216,"score_spread":0.199700165844799,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}