{"id":"W3093156732","doi":"10.1038/s41396-020-00809-6","title":"Genomic and kinetic analysis of novel Nitrospinae enriched by cell sorting","year":2020,"lang":"en","type":"article","venue":"The ISME Journal","topic":"Wastewater Treatment and Nitrogen Removal","field":"Environmental Science","cited_by":38,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Universität Wien; Natural Sciences and Engineering Research Council of Canada; EQUIPMENT BOKU VIENNA INSTITUTE OF BIOTECHNOLOGY; Universität für Bodenkultur Wien; Austrian Science Fund; Agence Nationale de la Recherche; Oxford Nanopore Technologies","keywords":"Biology; Nitrite; Strain (injury); Candidatus; Mixotroph; Heterotroph; Bacteria; Botany; Microbiology; Nitrogenase; Archaea; Biochemistry; 16S ribosomal RNA; Nitrogen fixation; Genetics; Ecology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001931846,0.0004994189,0.0004549263,0.0004419869,0.0001987946,0.0006816449,0.0003445992,0.0003205797,0.0005401022],"category_scores_gemma":[0.0003864707,0.0001813351,0.0003106357,0.0005938367,0.000216832,0.0001420091,0.0003747578,0.0004097564,0.0006289974],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002139012,"about_ca_system_score_gemma":0.0003129361,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005415107,"about_ca_topic_score_gemma":0.005070288,"domain_scores_codex":[0.9997117,0.00002587396,0.00002227533,0.00006567746,0.0001191793,0.00005530253],"domain_scores_gemma":[0.9996582,0.00007199751,0.00003921667,0.00003289723,0.0001398023,0.00005787867],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00003719413,0.0000254899,0.001002994,0.00001858105,0.0000043471,0.00001507419,0.00002937047,0.00003784815,0.9970758,0.00001714759,0.00002734518,0.001708701],"study_design_scores_gemma":[0.0000137101,0.0003121842,0.05405153,0.00001501259,0.00005060583,0.0002456005,0.000339782,0.004394816,0.9376888,0.00007941282,0.002788693,0.0000197975],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9888821,0.000332034,0.007197144,0.00008721145,0.0000262997,0.0001193335,0.001770578,0.00009878752,0.001486549],"genre_scores_gemma":[0.9611887,0.0006792982,0.01890127,0.0001161263,0.00002403345,0.00018333,0.01211318,0.0001120305,0.006682035],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005415107,"threshold_uncertainty_score":0.01076716,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01364955073752844,"score_gpt":0.2066060391695508,"score_spread":0.1929564884320223,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}