{"id":"W3093179741","doi":"10.1200/po.20.00013","title":"Development and Validation of a Genomic Tool to Predict Seminal Vesicle Invasion in Adenocarcinoma of the Prostate","year":2020,"lang":"en","type":"article","venue":"JCO Precision Oncology","topic":"Prostate Cancer Diagnosis and Treatment","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary; Decipher Biosciences (Canada)","funders":"","keywords":"Nomogram; Prostate cancer; Prostatectomy; Medicine; Logistic regression; Oncology; Cohort; Internal medicine; Prostate; Cancer; Urology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002164599,0.00008105,0.0002772346,0.00005750534,0.00002061703,0.000002941679,0.00006463718,0.00005749325,0.00002767249],"category_scores_gemma":[0.0001254427,0.00005457574,0.00002905706,0.000155886,0.00003388461,0.00003245586,0.0001498145,0.00007374834,0.000005655495],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002067747,"about_ca_system_score_gemma":0.0003249115,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001498627,"about_ca_topic_score_gemma":0.00001253989,"domain_scores_codex":[0.9990626,0.00005461686,0.0004017816,0.0002131912,0.0001585227,0.0001092879],"domain_scores_gemma":[0.9995005,0.00009816409,0.000133408,0.0001331957,0.00005685469,0.00007783828],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001784393,0.0003801692,0.6102674,0.0001558841,0.00003879281,0.00002469487,0.01114995,0.00008512485,0.1449296,0.00002633504,0.0008178978,0.2303398],"study_design_scores_gemma":[0.001826097,0.00144782,0.649914,0.0001593703,0.00002809846,0.000009389263,0.0001825563,0.00006740679,0.340358,0.00002747084,0.005938065,0.00004177551],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9957156,0.0003320225,0.00002768907,0.002691542,0.00005575499,0.001029904,0.00001043687,0.000005834126,0.0001311982],"genre_scores_gemma":[0.9955822,0.0001085024,0.00373425,0.0004282345,0.00002001827,0.00008975808,0.000007737292,0.000007729392,0.00002162073],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.230298,"threshold_uncertainty_score":0.2225534,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03633023327856901,"score_gpt":0.2947791237358805,"score_spread":0.2584488904573115,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}