{"id":"W3093438130","doi":"10.1101/2020.10.12.20209221","title":"Presence Of Infection By <i>Mycobacterium Avium</i> Subsp. <i>Paratuberculosis</i> In The Blood Of Patients With Crohn’s Disease And Control Subjects Shown By Multiple Laboratory Culture And Antibody Methods","year":2020,"lang":"en","type":"preprint","venue":"medRxiv","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Mycobacterium avium subspecies paratuberculosis; Serology; Bacteremia; Antibody; Blood culture; Paratuberculosis; Ulcerative colitis; Immunology; Microbiology; Crohn's disease; Medicine; Mycobacterium; Disease; Biology; Internal medicine; Tuberculosis; Pathology; Antibiotics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004750329,0.0003377741,0.0003584761,0.000857709,0.0003580391,0.000563461,0.0001320819,0.0005510356,0.001244835],"category_scores_gemma":[0.002014568,0.0002503686,0.0001811419,0.0003279746,0.0004302603,0.0003597632,0.0002430956,0.0003303974,0.0002420135],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002063776,"about_ca_system_score_gemma":0.0001178246,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001080561,"about_ca_topic_score_gemma":0.0008047187,"domain_scores_codex":[0.9993606,0.0001786793,0.00008268776,0.0001781451,0.00009783856,0.0001020608],"domain_scores_gemma":[0.9987305,0.0005312569,0.0003030952,0.00007297569,0.0001281341,0.0002340401],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001078778,0.0001606189,0.9917277,0.00002349354,0.00003281617,0.0004117773,0.0002621157,0.00002409144,0.004431508,0.00001481657,0.00008182459,0.001750515],"study_design_scores_gemma":[0.00004596297,0.001889999,0.9943098,0.000006910458,0.0000329157,0.002105891,0.0003770261,0.0001359667,0.0009220761,0.00001744611,0.00014951,0.000006501911],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9996508,0.00008999289,0.00002828715,0.00001018725,0.000003325217,0.000003406416,0.00003929088,0.000001727342,0.0001729145],"genre_scores_gemma":[0.9996804,0.00004425233,0.0000514138,0.00002625747,0.0000108813,0.000005002077,0.0001049183,7.66515e-7,0.00007611638],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001244835,"threshold_uncertainty_score":0.004164398,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009272010167148553,"score_gpt":0.287308638746089,"score_spread":0.2780366285789404,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}